CF810777
Information for CF810777
| Name | CF810777 |
|---|---|
| Accession | ID1723 |
| Length | 608 bp |
| Type | EST |
| Organism | highbush blueberry (Vaccinium corymbosum) |
| Library |
LIBEST_014530 cDNA cold acclimated Bluecrop library |
| Is singlet in |
Vaccinium corymbosum unigene v1 |
| NCBI Accession | CF810777 |
| Sequence |
|---|
| GGAAAGTCGAACGCTCCCGCTTCTCAAAGCCTCTCTTCTCTCTCCATTGTTCCAGTACTA TGCTCTCACTAACCTGCTTCCCTCTCTCTCCTCCCCCACCACTCCTCCGCCGCCGCACCA CCACCACCACCACACCCACTCCACGCCCCTCCCGACCTCTCCGCGCCACTGCGCGAAACA TTGCCATCGAGGAAGAAAAAGACGACGCCGTCGTTGTTAGGGGAAGAAGAGTGGGAGAAG ATCCTCCGCTGCCGGCGGGGCTGAGGAGGGAGGCGATGCCGGGACACGTGGCGGTGATTA TGGACGGGAACAGGAGGTGGGCCCGGATGAGGGGTTTGCCTGCTGTGTCGGGTTACGAAG CGGGTTTAAGGGCTTTGAAGGGTATGGTGGAGATGTGTTGTAGGTGGGGGAGTTGGGGTT CTTACTGTGTTTGCTTTCTCTTCTGATAACTGGCTTCGACCCAAGGTACAAGTAGGGTTC TTGATGCGTTTACTTGAAGGAGGGATGAAGAATGAACTGAACAATTTCATGAAGGATAAT ATTCGATTTTCTTGTATCGGGGATTCATCAAAGCTCCCANATCAACTAAAGGAACTGATA ACCTATGN |
Download sequence in fasta format





KEGG Analysis
| Analysis Date: 01-18-2011
(KEGG analysis for Vaccinium corymbosum unigene v1) K11778 DHDDS; cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-] |
InterProScan Analysis
Analysis Date: 01-18-2011
(InterProScan analysis for Vaccinium corymbosum unigene v1)
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Poplar (P. trichocarpa) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Query: CF810777
Best 10 Hits Shown
Query: CF810777
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
POPTR_0009s05010 | 1.30e-32 | 69.64% | POPTR_0009s05010.1 |
|
HSP 1
Score: 82.8037 bits (203), Expect = 1.30032e-32 Query: 246 PLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVS-GYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 74.7146 bits (182), Expect = 1.30032e-32 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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POPTR_0001s25800 | 6.34e-32 | 66.07% | POPTR_0001s25800.1 |
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HSP 1
Score: 80.1073 bits (196), Expect = 6.33905e-32 Query: 246 PLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVS-GYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 75.0998 bits (183), Expect = 6.33905e-32 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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POPTR_0001s31970 | 8.45e-28 | 64.81% | POPTR_0001s31970.1 |
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HSP 1
Score: 80.4925 bits (197), Expect = 8.45061e-28 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 60.8474 bits (146), Expect = 8.45061e-28 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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Peach (P. persica) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Query: CF810777
Best 10 Hits Shown
Query: CF810777
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
ppa016682m | 5.42e-33 | 70.91% | ppa016682m |
|
HSP 1
Score: 86.6557 bits (213), Expect = 5.42395e-33 Query: 246 PLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 71.633 bits (174), Expect = 5.42395e-33 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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ppa007586m | 3.70e-08 | 46.67% | ppa007586m |
|
HSP 1
Score: 48.9062 bits (115), Expect = 3.69964e-08 Query: 276 MPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 25.409 bits (54), Expect = 3.69964e-08 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLE 498 |
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Swissprot homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Query: CF810777
Best 10 Hits Shown
Query: CF810777
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
DDPS2_ARATH | 1.47e-27 | 54.24% | Dehydrodolichyl diphosphate synthase 2 O... |
|
HSP 1
Score: 73.1738 bits (178), Expect = 1.47348e-27 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 HSP 2 Score: 70.4774 bits (171), Expect = 1.47348e-27 Query: 237 EDPPLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 |
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UPPS_PROMM | 1.08e-20 | 54.72% | Undecaprenyl pyrophosphate synthase OS=P... |
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HSP 1
Score: 66.6254 bits (161), Expect = 1.07664e-20 Query: 252 PAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 53.9138 bits (128), Expect = 1.07664e-20 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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UPPS_PROMA | 3.08e-20 | 47.27% | Undecaprenyl pyrophosphate synthase OS=P... |
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HSP 1
Score: 60.4622 bits (145), Expect = 3.08114e-20 Query: 246 PLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 58.5362 bits (140), Expect = 3.08114e-20 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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UPPS_ANAVT | 5.22e-20 | 53.70% | Undecaprenyl pyrophosphate synthase OS=A... |
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HSP 1
Score: 67.781 bits (164), Expect = 5.22154e-20 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 50.447 bits (119), Expect = 5.22154e-20 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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UPPS1_ANASP | 5.22e-20 | 53.70% | Undecaprenyl pyrophosphate synthase 1 OS... |
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HSP 1
Score: 67.781 bits (164), Expect = 5.22154e-20 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 50.447 bits (119), Expect = 5.22154e-20 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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UPPS_SYNPX | 6.78e-20 | 52.83% | Undecaprenyl pyrophosphate synthase OS=S... |
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HSP 1
Score: 63.5438 bits (153), Expect = 6.78292e-20 Query: 252 PAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 54.299 bits (129), Expect = 6.78292e-20 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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UPPS_SYNY3 | 1.15e-19 | 48.15% | Undecaprenyl pyrophosphate synthase OS=S... |
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HSP 1
Score: 64.3142 bits (155), Expect = 1.14868e-19 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 52.7582 bits (125), Expect = 1.14868e-19 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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UPPS2_ANASP | 2.06e-18 | 49.06% | Undecaprenyl pyrophosphate synthase 2 OS... |
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HSP 1
Score: 60.8474 bits (146), Expect = 2.06346e-18 Query: 252 PAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 51.9878 bits (123), Expect = 2.06346e-18 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLK 591 |
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UPPS_THEEB | 2.69e-18 | 51.85% | Undecaprenyl pyrophosphate synthase OS=T... |
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HSP 1
Score: 65.4698 bits (158), Expect = 2.6852e-18 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 46.9802 bits (110), Expect = 2.6852e-18 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLK 591 |
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UPPS_GLOVI | 2.69e-18 | 51.85% | Undecaprenyl pyrophosphate synthase OS=G... |
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HSP 1
Score: 61.6178 bits (148), Expect = 2.68584e-18 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 50.8322 bits (120), Expect = 2.68584e-18 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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TrEMBL homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Query: CF810777
Best 10 Hits Shown
Query: CF810777
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
A5BX88_VITVI | 4.77e-29 | 67.92% | Putative uncharacterized protein OS=Viti... |
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HSP 1
Score: 84.3445 bits (207), Expect = 4.7673e-29 Query: 252 PAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 68.1662 bits (165), Expect = 4.7673e-29 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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B9GII5_POPTR | 4.85e-29 | 65.45% | Predicted protein (Fragment) OS=Populus ... |
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HSP 1
Score: 77.411 bits (189), Expect = 4.84515e-29 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVS-GYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 75.0998 bits (183), Expect = 4.84515e-29 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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B5X0P4_ARATH | 2.08e-26 | 54.24% | At5g58770 OS=Arabidopsis thaliana PE=2 S... |
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HSP 1
Score: 73.1738 bits (178), Expect = 2.08185e-26 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 HSP 2 Score: 70.4774 bits (171), Expect = 2.08185e-26 Query: 237 EDPPLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 |
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A9RXS2_PHYPA | 2.09e-26 | 53.33% | Predicted protein (Fragment) OS=Physcomi... |
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HSP 1
Score: 75.485 bits (184), Expect = 2.09284e-26 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 HSP 2 Score: 68.1662 bits (165), Expect = 2.09284e-26 Query: 237 EDPPLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 |
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B9SI16_RICCO | 2.71e-26 | 57.63% | Undecaprenyl pyrophosphate synthetase, p... |
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HSP 1
Score: 72.0182 bits (175), Expect = 2.71008e-26 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 HSP 2 Score: 71.2478 bits (173), Expect = 2.71008e-26 Query: 237 EDP-PLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 |
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A9T0L2_PHYPA | 3.54e-26 | 56.90% | Predicted protein OS=Physcomitrella pate... |
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HSP 1
Score: 71.633 bits (174), Expect = 3.54338e-26 Query: 237 EDPPLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 71.2478 bits (173), Expect = 3.54338e-26 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 |
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B9HP45_POPTR | 4.62e-26 | 60.00% | Predicted protein OS=Populus trichocarpa... |
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HSP 1
Score: 74.7146 bits (182), Expect = 4.62352e-26 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELIT 603 HSP 2 Score: 67.781 bits (164), Expect = 4.62352e-26 Query: 276 MPGHVAVIMDGNRRWARMRGLPAVS-GYEAGLRALKGMVEMCCRWG 410 |
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B9GGB3_POPTR | 1.02e-25 | 64.81% | Predicted protein (Fragment) OS=Populus ... |
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HSP 1
Score: 80.4925 bits (197), Expect = 1.01904e-25 Query: 249 LPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 60.8474 bits (146), Expect = 1.01904e-25 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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D7SJY4_VITVI | 1.02e-25 | 66.67% | Whole genome shotgun sequence of line PN... |
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HSP 1
Score: 73.1738 bits (178), Expect = 1.01999e-25 Query: 276 MPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 68.1662 bits (165), Expect = 1.01999e-25 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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D7MQH3_ARALY | 1.32e-25 | 52.54% | Putative uncharacterized protein OS=Arab... |
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HSP 1
Score: 72.0182 bits (175), Expect = 1.3185e-25 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 HSP 2 Score: 68.9366 bits (167), Expect = 1.3185e-25 Query: 237 EDPPLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 |
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Grape (V. vinifera) homologs
Analysis Date: 01-25-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Query: CF810777
Best 10 Hits Shown
Query: CF810777
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
GSVIVT01024746001 | 5.14e-28 | 66.67% | GSVIVT01024746001 assembled CDS |
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HSP 1
Score: 73.1738 bits (178), Expect = 5.14402e-28 Query: 276 MPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 68.1662 bits (165), Expect = 5.14402e-28 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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GSVIVT01005618001 | 9.28e-07 | 46.67% | GSVIVT01005618001 assembled CDS |
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HSP 1
Score: 46.9802 bits (110), Expect = 9.28339e-07 Query: 276 MPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 22.3274 bits (46), Expect = 9.28339e-07 Query: 427 VFAFSSDNWLRPKVQVGFLMRLL 495 |
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Arabidopsis (A. thaliana) homologs
Analysis Date: 02-10-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Query: CF810777
Best 10 Hits Shown
Query: CF810777
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
AT5G58770.1 | 1.53e-28 | 54.24% | Undecaprenyl pyrophosphate synthetase f... |
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HSP 1
Score: 73.1738 bits (178), Expect = 1.52925e-28 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 HSP 2 Score: 70.4774 bits (171), Expect = 1.52925e-28 Query: 237 EDPPLPAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 |
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AT5G58780.1 | 1.09e-17 | 56.00% | Undecaprenyl pyrophosphate synthetase f... |
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HSP 1
Score: 58.9214 bits (141), Expect = 1.0903e-17 Query: 261 LRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 48.1358 bits (113), Expect = 1.0903e-17 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQL 588 |
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AT2G23410.1 | 3.29e-16 | 52.94% | cis-prenyltransferase | chr2:9966247-99... |
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HSP 1
Score: 59.6918 bits (143), Expect = 3.28843e-16 Query: 258 GLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 42.3578 bits (98), Expect = 3.28843e-16 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEG-GMKNELNNFMKDNIRFSCIGDSSKLPXQL 588 |
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AT5G58784.1 | 3.29e-16 | 53.06% | Undecaprenyl pyrophosphate synthetase f... |
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HSP 1
Score: 53.9138 bits (128), Expect = 3.28873e-16 Query: 267 REAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWGS 413 HSP 2 Score: 48.1358 bits (113), Expect = 3.28873e-16 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQLKELI 600 |
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AT2G23400.1 | 5.58e-16 | 48.00% | Undecaprenyl pyrophosphate synthetase f... |
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HSP 1
Score: 55.0694 bits (131), Expect = 5.58138e-16 Query: 261 LRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 46.2098 bits (108), Expect = 5.58138e-16 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNNFMKDNIRFSCIGDSSKLPXQL 588 |
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AT5G58782.1 | 9.83e-11 | 41.98% | Undecaprenyl pyrophosphate synthetase f... |
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HSP 1
Score: 63.5438 bits (153), Expect = 9.83359e-11 Query: 252 PAGLRREAMPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG------------SWGSY-----CVCFLF 443 |
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AT2G17570.1 | 6.16e-07 | 48.89% | Undecaprenyl pyrophosphate synthetase f... |
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HSP 1
Score: 46.595 bits (109), Expect = 6.16451e-07 Query: 276 MPGHVAVIMDGNRRWARMRGLPAVSGYEAGLRALKGMVEMCCRWG 410 HSP 2 Score: 23.8682 bits (50), Expect = 6.16451e-07 Query: 424 TVFAFSSDNWLRPKVQVGFLMRLLEGGMKNELNN---FMKDNIRFSCIGDSSKLPXQLK 591 |
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| Related info for CF810777 |
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