CF810514
Information for CF810514
| Name | CF810514 |
|---|---|
| Accession | ID1845 |
| Length | 644 bp |
| Type | EST |
| Organism | highbush blueberry (Vaccinium corymbosum) |
| Library |
LIBEST_014530 cDNA cold acclimated Bluecrop library |
| Is singlet in |
Vaccinium corymbosum unigene v1 |
| NCBI Accession | CF810514 |
| Sequence |
|---|
| CCGCCGTCGATGACTACTACGGCGGTTGGGCGATTTTCGAAAATCATGCTGCGATGAAGA AGAAGAAGAAGAAAGGTCTGTCTCCGTTTCTGTTGGTGGGTATTGGGAGTTCAGTAGCTG CTTTACTTGCCGCAATTGCTTACTTCTCACTATCCAGAAGAGGTCTTGCTATCAAATTTA GCAGTCCACTGCCTGCGTTGCATGGGATTATAAGGCTATCTACTTCTGATAAAGATGTTG AGAGTAAAAGCAAGGATTATGATGCATCACCGGCTGATGATGTGGTTCCAGAGGCAAACA TGGAAAGTTTAAATGATGTGTCTGTTGAAACATCCGTATCAGAGGCGAACCATATTGAGA GACAAGGAGGAAAGCAAGGACGTATTATAGTTCCAGTTGCTATGGATTCAACACAGGAAG AAGCTCTGTTGATGATGAGGAAACTGAAGATAATTGAAGATGATTTCAAGGCAGATGAAT TGTGCACCAGGAGGGNAATATGCAAGATGGCTTGTTCGAGCAAATTCACTACTGGGAAAG GAATCCAATGCATCAAATCTCTCCATCTGNTTGCGCTTNCAGGGTCCATGTTTTAGTGCA TTTGATGATGTGAGCATTGAAGACCCTGNATTTTGGGGTCCATT |
Download sequence in fasta format




InterProScan Analysis
Analysis Date: 01-18-2011
(InterProScan analysis for Vaccinium corymbosum unigene v1)
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Poplar (P. trichocarpa) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Query: CF810514
Best 10 Hits Shown
Query: CF810514
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
POPTR_0010s14090 | 2.32e-25 | 40.49% | POPTR_0010s14090.1 |
|
HSP 1
Score: 93.9745 bits (232), Expect = 2.32335e-25 Query: 9 DDYYGGWAIFENHAAMXXXXXXGLSPFLLV-GIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 39.2762 bits (90), Expect = 2.32335e-25 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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POPTR_0010s14090 | 2.33e-25 | 40.49% | POPTR_0010s14090.2 |
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HSP 1
Score: 93.9745 bits (232), Expect = 2.32517e-25 Query: 9 DDYYGGWAIFENHAAMXXXXXXGLSPFLLV-GIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 39.2762 bits (90), Expect = 2.32517e-25 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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POPTR_0012s13070 | 3.32e-08 | 24.73% | POPTR_0012s13070.1 |
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HSP 1
Score: 43.8986 bits (102), Expect = 3.31726e-08 Query: 228 DKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRRXICK 506 HSP 2 Score: 31.187 bits (69), Expect = 3.31726e-08 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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Peach (P. persica) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Query: CF810514
Best 10 Hits Shown
Query: CF810514
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
ppa004900m | 2.71e-17 | 73.17% | ppa004900m |
|
HSP 1
Score: 63.5438 bits (153), Expect = 2.70978e-17 Query: 372 KQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 41.9726 bits (97), Expect = 2.70978e-17 Query: 499 YARWLVRANSLLGKESNASNLSIX-LRXQGPCFSAFDDVSIEDPXF 633 |
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ppa001129m | 1.80e-08 | 29.55% | ppa001129m |
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HSP 1
Score: 41.2022 bits (95), Expect = 1.80178e-08 Query: 261 DASPADDVVPEA-NMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRRXICKMACSS 521 HSP 2 Score: 34.2686 bits (77), Expect = 1.80178e-08 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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TrEMBL homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Query: CF810514
Best 10 Hits Shown
Query: CF810514
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
D7T9A7_VITVI | 1.21e-28 | 41.61% | Whole genome shotgun sequence of line PN... |
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HSP 1
Score: 112.849 bits (281), Expect = 1.20521e-28 Query: 12 DYYGGWAIFENHAAMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 38.5058 bits (88), Expect = 1.20521e-28 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIED 624 |
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B9SEH4_RICCO | 1.94e-25 | 41.10% | Putative uncharacterized protein OS=Rici... |
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HSP 1
Score: 94.3597 bits (233), Expect = 1.94288e-25 Query: 6 VDDYYGGWAIFENHAAMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 46.2098 bits (108), Expect = 1.94288e-25 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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Q940J0_ARATH | 4.64e-24 | 37.95% | Putative uncharacterized protein T5M7.13... |
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HSP 1
Score: 97.0561 bits (240), Expect = 4.63992e-24 Query: 3 AVDDYYGGWAIFENHA-AMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSD-KDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 38.891 bits (89), Expect = 4.63992e-24 Query: 499 YARWLVRANSLLGKESNASNLSI-XLRXQGPCFSAFDDVSIEDPXF 633 |
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B9HWM9_POPTR | 2.90e-23 | 40.49% | Predicted protein OS=Populus trichocarpa... |
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HSP 1
Score: 93.9745 bits (232), Expect = 2.90104e-23 Query: 9 DDYYGGWAIFENHAAMXXXXXXGLSPFLLV-GIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 39.2762 bits (90), Expect = 2.90104e-23 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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D7LQT2_ARALY | 6.39e-23 | 37.35% | Putative uncharacterized protein OS=Arab... |
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HSP 1
Score: 97.4413 bits (241), Expect = 6.3939e-23 Query: 3 AVDDYYGGWAIFENHA--AMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 34.6538 bits (78), Expect = 6.3939e-23 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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Q9LI75_ARATH | 2.38e-22 | 35.84% | Dbj|BAA17888.1 OS=Arabidopsis thaliana G... |
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HSP 1
Score: 91.2781 bits (225), Expect = 2.38428e-22 Query: 3 AVDDYYGGWAIFENHA-AMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRG-------LAIKFSSPLPALHGIIRLSTSD-KDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 38.891 bits (89), Expect = 2.38428e-22 Query: 499 YARWLVRANSLLGKESNASNLSI-XLRXQGPCFSAFDDVSIEDPXF 633 |
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A5B730_VITVI | 3.25e-17 | 38.74% | Putative uncharacterized protein OS=Viti... |
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HSP 1
Score: 74.3294 bits (181), Expect = 3.24798e-17 Query: 162 GLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 38.5058 bits (88), Expect = 3.24798e-17 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIED 624 |
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C5Z2A0_SORBI | 3.12e-08 | 25.29% | Putative uncharacterized protein Sb10g01... |
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HSP 1
Score: 55.0694 bits (131), Expect = 3.11806e-08 Query: 9 DDYYGGWAIFENHAAMXXXXXXGLSPFLLVGIGSSVAALLAAIAY-FSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPAD--DVVPEANMESLNDVSVETSVSE-ANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRRXICK 506 HSP 2 Score: 27.335 bits (59), Expect = 3.11806e-08 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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C5WRT7_SORBI | 1.85e-07 | 29.21% | Putative uncharacterized protein Sb01g00... |
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HSP 1
Score: 49.2914 bits (116), Expect = 1.84802e-07 Query: 228 DKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 30.4166 bits (67), Expect = 1.84802e-07 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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Grape (V. vinifera) homologs
Analysis Date: 01-25-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Query: CF810514
Best 10 Hits Shown
Query: CF810514
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
GSVIVT01011967001 | 5.91e-31 | 41.61% | GSVIVT01011967001 assembled CDS |
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HSP 1
Score: 112.849 bits (281), Expect = 5.90518e-31 Query: 12 DYYGGWAIFENHAAMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSDKDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 38.5058 bits (88), Expect = 5.90518e-31 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIED 624 |
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GSVIVT01028918001 | 2.60e-08 | 28.28% | GSVIVT01028918001 assembled CDS |
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HSP 1
Score: 43.8986 bits (102), Expect = 2.59958e-08 Query: 228 DKDVESKSK-DYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRRXICKMACSS 521 HSP 2 Score: 30.8018 bits (68), Expect = 2.59958e-08 Query: 499 YARWLVRANSLLGKESNASNLSIXLRXQGPCFSAFDDVSIEDPXF 633 |
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Arabidopsis (A. thaliana) homologs
Analysis Date: 02-10-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Query: CF810514
Best 10 Hits Shown
Query: CF810514
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
AT3G25680.1 | 3.24e-26 | 37.95% | FUNCTIONS IN: molecular_function unknow... |
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HSP 1
Score: 97.0561 bits (240), Expect = 3.23692e-26 Query: 3 AVDDYYGGWAIFENHA-AMXXXXXXGLSPFLLVGIGSSVAALLAAIAYFSLSRRGLAIKFSSPLPALHGIIRLSTSD-KDVESKSKDYDASPADDVVPEANMESLNDVSVETSVSEANHIERQGGKQGRIIVPVAMDSTQEEALLMMRKLKIIEDDFKADELCTRR 494 HSP 2 Score: 38.891 bits (89), Expect = 3.23692e-26 Query: 499 YARWLVRANSLLGKESNASNLSI-XLRXQGPCFSAFDDVSIEDPXF 633 |
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| Related info for CF810514 |
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