CF810429
Information for CF810429
| Name | CF810429 |
|---|---|
| Accession | ID2213 |
| Length | 617 bp |
| Type | EST |
| Organism | highbush blueberry (Vaccinium corymbosum) |
| Library |
LIBEST_014530 cDNA cold acclimated Bluecrop library |
| Is singlet in |
Vaccinium corymbosum unigene v1 |
| NCBI Accession | CF810429 |
| Sequence |
|---|
| CAAAGCTTCCATCTGCATTTCTACAAGTAATTTGTTGGGTCTTGGGGGAATATGGAACTG CAGATGGGAAGTATTCAGCCTCTTATATCACAGGGAAGTTGTGTGACGTGGCAGAATCAC ATTCCAGTGATGACACTGTAAAGGCATATGCAGTCGCAGCCCTAATGAAAATATATGCAT TTGAGATTGCAGCTGGGAGAAAAGTGGACCTGCTACCCGAGTGCCAATCTTTAATTGAAG AACTATCAGCATCACACTCAACAGATTTGCAACAGCGTGCTTATGAACTTCAAGCAGTCA TCAGCTTGGATGCTCGTGCTGTTGAAAGTATAATGCCACTAGATGCAAGTTGTGAAGACA TTGAGATTGATAAAAGCCTTTCATTCCTCAATAGTTTTGTCCAACAGTCATTGGAAAAGG GTGCTCAACCCTATATTCCAGAGAATGAACGTTCTGGAGTTTTGGATGTTGCCAGCCTTA GAAGCCAAGACCACCACGAAGCTTCAACACATTCTCTTAGGTTTGAGGCCTACGAGCTTC CAAAACCAGTGATTCCATCAAGGGCTCCTCCTGTTTCAGTCTCCCATTCAACTGAACTTG TTCCAGTACCAGAGCCT |
Download sequence in fasta format





GO terms assigned to this feature
| Accession | Category | Term |
|---|---|---|
| GO:0006886 | biological_process | intracellular protein transport |
| GO:0016192 | biological_process | vesicle-mediated transport |
| GO:0030117 | cellular_component | membrane coat |
| GO:0005488 | molecular_function | binding |
| GO:0005515 | molecular_function | protein binding |
KEGG Analysis
| Analysis Date: 01-18-2011
(KEGG analysis for Vaccinium corymbosum unigene v1) K12400 AP4E1; AP-4 complex subunit epsilon-1 |
InterProScan Analysis
Analysis Date: 01-18-2011
(InterProScan analysis for Vaccinium corymbosum unigene v1)
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Poplar (P. trichocarpa) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Query: CF810429
Best 10 Hits Shown
Query: CF810429
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
POPTR_0004s24340 | 1.42e-93 | 80.49% | POPTR_0004s24340.2 |
|
HSP 1
Score: 338.961 bits (868), Expect = 1.41565e-93 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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POPTR_0004s24340 | 1.42e-93 | 80.49% | POPTR_0004s24340.1 |
|
HSP 1
Score: 338.961 bits (868), Expect = 1.41565e-93 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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Peach (P. persica) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Query: CF810429
Best 10 Hits Shown
Query: CF810429
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
ppa001563m | 1.45e-76 | 69.76% | ppa001563m |
|
HSP 1
Score: 281.952 bits (720), Expect = 1.45347e-76 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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ppa023280m | 5.03e-53 | 76.52% | ppa023280m |
|
HSP 1
Score: 203.756 bits (517), Expect = 5.03039e-53 Query: 222 CQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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ppa007347m | 1.57e-38 | 75.79% | ppa007347m |
|
HSP 1
Score: 155.606 bits (392), Expect = 1.57101e-38 Query: 333 MPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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ppa007356m | 5.97e-38 | 75.79% | ppa007356m |
|
HSP 1
Score: 153.68 bits (387), Expect = 5.96985e-38 Query: 333 MPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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ppa003225m | 1.86e-31 | 84.93% | ppa003225m |
|
HSP 1
Score: 132.109 bits (331), Expect = 1.86009e-31 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPE 221 |
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ppb009195m | 2.97e-29 | 80.26% | ppb009195m |
|
HSP 1
Score: 124.79 bits (312), Expect = 2.96968e-29 Query: 285 ELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTH 512 |
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Swissprot homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Query: CF810429
Best 10 Hits Shown
Query: CF810429
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
AP4E1_HUMAN | 2.14e-17 | 32.20% | AP-4 complex subunit epsilon-1 OS=Homo s... |
|
HSP 1
Score: 88.9669 bits (219), Expect = 2.13699e-17 Query: 9 PSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYEL 539 |
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AP4E1_MOUSE | 1.53e-15 | 32.77% | AP-4 complex subunit epsilon-1 OS=Mus mu... |
|
HSP 1
Score: 82.8037 bits (203), Expect = 1.53147e-15 Query: 9 PSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYEL 539 |
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AP4E_DICDI | 2.80e-09 | 27.03% | AP-4 complex subunit epsilon OS=Dictyost... |
|
HSP 1
Score: 62.003 bits (149), Expect = 2.79747e-09 Query: 18 FLQVICWVLGEYGT---ADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSG--VLDVASLRSQDHHEASTHSLRFEAYELPKPVIP 557 |
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TrEMBL homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Query: CF810429
Best 10 Hits Shown
Query: CF810429
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
D7TFC9_VITVI | 8.89e-93 | 81.46% | Whole genome shotgun sequence of line PN... |
|
HSP 1
Score: 343.199 bits (879), Expect = 8.88661e-93 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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B9S1S1_RICCO | 1.16e-92 | 81.46% | AP-1 complex subunit gamma-2, putative O... |
|
HSP 1
Score: 342.813 bits (878), Expect = 1.16063e-92 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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B9N0P6_POPTR | 1.68e-91 | 80.49% | Predicted protein OS=Populus trichocarpa... |
|
HSP 1
Score: 338.961 bits (868), Expect = 1.67594e-91 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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Q9C6W3_ARATH | 3.38e-84 | 75.12% | Epsilon-adaptin, putative OS=Arabidopsis... |
|
HSP 1
Score: 314.694 bits (805), Expect = 3.38475e-84 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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Q8L7A9_ARATH | 3.38e-84 | 75.12% | Putative epsilon-adaptin OS=Arabidopsis ... |
|
HSP 1
Score: 314.694 bits (805), Expect = 3.38475e-84 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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C5XG75_SORBI | 3.38e-84 | 73.17% | Putative uncharacterized protein Sb03g04... |
|
HSP 1
Score: 314.694 bits (805), Expect = 3.38475e-84 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVS-HSTELVPVPE 614 |
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D7KGL8_ARALY | 2.87e-83 | 75.12% | Putative uncharacterized protein OS=Arab... |
|
HSP 1
Score: 311.612 bits (797), Expect = 2.86536e-83 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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C0PHF1_MAIZE | 6.38e-83 | 72.68% | Putative uncharacterized protein OS=Zea ... |
|
HSP 1
Score: 310.457 bits (794), Expect = 6.38336e-83 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVS-HSTELVPVPE 614 |
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Q8RZX0_ORYSJ | 2.97e-80 | 70.73% | Os01g0916200 protein OS=Oryza sativa sub... |
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HSP 1
Score: 301.597 bits (771), Expect = 2.96519e-80 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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A3A0W6_ORYSJ | 2.97e-80 | 70.73% | Putative uncharacterized protein OS=Oryz... |
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HSP 1
Score: 301.597 bits (771), Expect = 2.96519e-80 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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Grape (V. vinifera) homologs
Analysis Date: 01-25-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Query: CF810429
Best 10 Hits Shown
Query: CF810429
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
GSVIVT01036887001 | 4.54e-95 | 81.46% | GSVIVT01036887001 assembled CDS |
|
HSP 1
Score: 343.199 bits (879), Expect = 4.54476e-95 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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Arabidopsis (A. thaliana) homologs
Analysis Date: 02-10-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Query: CF810429
Best 10 Hits Shown
Query: CF810429
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
AT1G31730.1 | 2.49e-86 | 75.12% | Adaptin family protein | chr1:11359907-... |
|
HSP 1
Score: 314.694 bits (805), Expect = 2.48685e-86 Query: 3 KLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAESHSSDDTVKAYAVAALMKIYAFEIAAGRKVDLLPECQSLIEELSASHSTDLQQRAYELQAVISLDARAVESIMPLDASCEDIEIDKSLSFLNSFVQQSLEKGAQPYIPENERSGVLDVASLRSQDHHEASTHSLRFEAYELPKPVIPSRAPPVSVSHSTELVPVPEP 617 |
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| Related info for CF810429 |
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