Vaccinium_corymbosum_v1_Contig678
Information for Vaccinium_corymbosum_v1_Contig678
| Name | Vaccinium_corymbosum_v1_Contig678 |
|---|---|
| Accession | ID5352 |
| Length | 574 bp |
| Type | contig |
| Organism | highbush blueberry (Vaccinium corymbosum) |
| Sequence |
|---|
| GTTGTGGGTTTCGGAAATCGCTATCCTAAGCACGTCCATCATAGAGGTGCATCGATCCCC AAAAACAAGGTCAAGTATAATTGTAAAGGAGGGTGGAAATGGAGGGACACATCAAAGCCA AACCCAAACACCATTGTCGGAGCCATGGTTGCGGGCCCTGTACAAACACGACGGTTTCCA CGACGTGCGTACTAACTACAATTACACGGAGCCCACCATTGCAGGAAATGCCGGTTTAGT TGCTGCCCTTGTGGCTCTCTCAGGTGAAAAGAGTGTTGGGATTGACAAAAACACCATGTT CTCTGCTGTTCCACCCATGTCTCCTACTCCACCACCACCTCCAGCGCCATGGAAACCATG ATGTTGTTCGTAGATGATTTTGGCTTTATAGTTTTTGGAATCTGAACATTGTGAGAAGTG AAAACAAAACAAAAAAATGTGATGGGGCATAAAAAACTGCAGGTGGCTGGGGATGGAAAC TAGAGACTTGGACTACCTTGNACAAAGTGAGATTTCGATATTGAACTTGNTTTTGAATTT TTTTTTNGTGATTATACATAGCATATGTATGTAC |
Download sequence in fasta format





GO terms assigned to this feature
| Accession | Category | Term |
|---|---|---|
| GO:0005975 | biological_process | carbohydrate metabolic process |
| GO:0003824 | molecular_function | catalytic activity |
InterProScan Analysis
Analysis Date: 01-18-2011
(InterProScan analysis for Vaccinium corymbosum unigene v1)
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Loading...

Peach (P. persica) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
ppa002911m | 8.28e-40 | 92.45% | ppa002911m |
|
HSP 1
Score: 115.161 bits (287), Expect = 8.28433e-40 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 65.855 bits (159), Expect = 8.28433e-40 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
ppa014845m | 2.06e-34 | 81.13% | ppa014845m |
|
HSP 1
Score: 101.293 bits (251), Expect = 2.06119e-34 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 61.6178 bits (148), Expect = 2.06119e-34 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSV-GIDKNTMFSAV 310 |
|||
ppa026228m | 6.49e-20 | 73.58% | ppa026228m |
|
HSP 1
Score: 93.5893 bits (231), Expect = 6.49388e-20 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 52.7582 bits (125), Expect = 1.2703e-07 Query: 83 VKEGGNGGTHQSQTQTPLSEPWLRALY----KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
ppa004387m | 3.75e-12 | 44.44% | ppa004387m |
|
HSP 1
Score: 65.0846 bits (157), Expect = 3.75265e-12 Query: 1 VVGFGNRYPKHVHHRGASIPK---NKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 HSP 2 Score: 22.7126 bits (47), Expect = 3.75265e-12 Query: 164 KHDGFHDVRTNYNYTEP 214 |
|||
ppa004653m | 1.38e-11 | 44.64% | ppa004653m |
|
HSP 1
Score: 64.3142 bits (155), Expect = 1.3817e-11 Query: 1 VVGFGNRYPKHVHHRGASIP---KNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 21.557 bits (44), Expect = 1.3817e-11 Query: 170 DGFHDVRTNYNYTEP 214 |
|||
ppa022524m | 1.78e-11 | 49.21% | ppa022524m |
|
HSP 1
Score: 60.8474 bits (146), Expect = 1.78329e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYN---CKGGWK-WRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.78329e-11 Query: 164 KHDGFHDVRTNYNYTEPTI 220 |
|||
ppa005285m | 3.23e-11 | 54.39% | ppa005285m |
|
HSP 1
Score: 64.6994 bits (156), Expect = 3.23036e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKV---KYNCKGGW-KWRDTSKPNPNTIVGAMVAGP 159 |
|||
ppa004644m | 2.09e-10 | 44.44% | ppa004644m |
|
HSP 1
Score: 62.003 bits (149), Expect = 2.09386e-10 Query: 1 VVGFGNRYPKHVHHRGASIPKNKV---KYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 |
|||
ppa004719m | 4.06e-10 | 42.19% | ppa004719m |
|
HSP 1
Score: 56.6102 bits (135), Expect = 4.06388e-10 Query: 1 VVGFGNRYPKHVHHRGASIP---KNKVKYNCKGGWK-WRDTSKPNPNTIVGAMVAGPVQTRRFP 180 HSP 2 Score: 24.2534 bits (51), Expect = 4.06388e-10 Query: 164 KHDGFHDVRTNYNYTEP 214 |
|||
ppa021556m | 5.28e-10 | 49.12% | ppa021556m |
|
HSP 1
Score: 59.3066 bits (142), Expect = 5.2808e-10 Query: 1 VVGFGNRYPKHVHHRGA---SIPKNKVKYNCKGGW-KWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 21.1718 bits (43), Expect = 5.2808e-10 Query: 164 KHDGFHDVRTNYNYTEP 214 |
|||
Loading...

Swissprot homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
GUN25_ARATH | 5.26e-33 | 88.68% | Endoglucanase 25 OS=Arabidopsis thaliana... |
|
HSP 1
Score: 112.079 bits (279), Expect = 5.26054e-33 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 49.6766 bits (117), Expect = 5.26054e-33 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSV--GIDKNTMFSAV 310 |
|||
GUN21_ARATH | 5.41e-29 | 69.81% | Endoglucanase 21 OS=Arabidopsis thaliana... |
|
HSP 1
Score: 80.8777 bits (198), Expect = 5.41407e-29 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.3958 bits (163), Expect = 5.41407e-29 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSV-GIDKNTMFSAV 310 |
|||
GUN9_ORYSJ | 2.49e-22 | 84.91% | Endoglucanase 9 OS=Oryza sativa subsp. j... |
|
HSP 1
Score: 105.145 bits (261), Expect = 2.48903e-22 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 53.5286 bits (127), Expect = 8.59444e-07 Query: 83 VKEGGNGGTHQSQTQTPLSEPWLRALY----KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
GUN7_ARATH | 2.05e-20 | 60.38% | Endoglucanase 7 OS=Arabidopsis thaliana ... |
|
HSP 1
Score: 77.7962 bits (190), Expect = 2.04825e-20 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 41.5874 bits (96), Expect = 2.04825e-20 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
GUN10_ORYSJ | 5.19e-20 | 75.47% | Endoglucanase 10 OS=Oryza sativa subsp. ... |
|
HSP 1
Score: 97.4413 bits (241), Expect = 5.18994e-20 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 55.8398 bits (133), Expect = 1.73172e-07 Query: 83 VKEGGNGGTHQSQTQTPLSEPWLRALY----KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSG-EKSVGIDKNTMFSAV 310 |
|||
GUN12_ORYSJ | 1.68e-19 | 57.63% | Endoglucanase 12 OS=Oryza sativa subsp. ... |
|
HSP 1
Score: 84.7297 bits (208), Expect = 1.67572e-19 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 31.5722 bits (70), Expect = 1.67572e-19 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXS----GEKSVGIDKNTMFSAV 310 |
|||
GUN18_ORYSJ | 1.18e-11 | 55.93% | Endoglucanase 18 OS=Oryza sativa subsp. ... |
|
HSP 1
Score: 69.3218 bits (168), Expect = 1.18255e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 20.4014 bits (41), Expect = 1.18255e-11 Query: 161 YKHDGFHDVRTNYNYTEPT 217 |
|||
GUN_PHAVU | 1.99e-11 | 50.79% | Endoglucanase OS=Phaseolus vulgaris PE=2... |
|
HSP 1
Score: 64.3142 bits (155), Expect = 1.99483e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKV---KYNCKGGWK-WRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.99483e-11 Query: 167 HDGFHDVRTNYNYTEPT 217 |
|||
GUN1_PERAE | 4.36e-11 | 51.79% | Endoglucanase 1 OS=Persea americana GN=C... |
|
HSP 1
Score: 66.2402 bits (160), Expect = 4.36139e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYN---CKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 21.557 bits (44), Expect = 4.36139e-11 Query: 170 DGFHDVRTNYNYTEP 214 |
|||
GUN10_ARATH | 5.75e-11 | 50.85% | Endoglucanase 10 OS=Arabidopsis thaliana... |
|
HSP 1
Score: 67.3958 bits (163), Expect = 5.75147e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 |
|||
Loading...

Poplar (P. trichocarpa) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
POPTR_0003s15140 | 1.39e-40 | 88.68% | POPTR_0003s15140.1 |
|
HSP 1
Score: 116.316 bits (290), Expect = 1.38852e-40 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.781 bits (164), Expect = 1.38852e-40 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
POPTR_0001s11870 | 8.84e-40 | 90.57% | POPTR_0001s11870.1 |
|
HSP 1
Score: 116.701 bits (291), Expect = 8.84474e-40 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 64.6994 bits (156), Expect = 8.84474e-40 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
POPTR_0010s18480 | 5.78e-28 | 64.41% | POPTR_0010s18480.1 |
|
HSP 1
Score: 95.1301 bits (235), Expect = 5.77708e-28 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 46.595 bits (109), Expect = 5.77708e-28 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
POPTR_0008s07900 | 9.76e-28 | 62.71% | POPTR_0008s07900.1 |
|
HSP 1
Score: 93.9745 bits (232), Expect = 9.75687e-28 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 46.9802 bits (110), Expect = 9.75687e-28 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
POPTR_0005s21090 | 1.04e-13 | 58.49% | POPTR_0005s21090.1 |
|
HSP 1
Score: 72.7886 bits (177), Expect = 1.03975e-13 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 20.7866 bits (42), Expect = 1.03975e-13 Query: 164 KHDGFHDVRTNYNYTEPTI 220 |
|||
POPTR_0005s25890 | 2.15e-13 | 50.85% | POPTR_0005s25890.1 |
|
HSP 1
Score: 72.4034 bits (176), Expect = 2.15396e-13 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 |
|||
POPTR_0002s02550 | 3.67e-13 | 50.85% | POPTR_0002s02550.1 |
|
HSP 1
Score: 71.633 bits (174), Expect = 3.6741e-13 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 |
|||
POPTR_0001s11430 | 2.39e-12 | 50.00% | POPTR_0001s11430.1 |
|
HSP 1
Score: 67.781 bits (164), Expect = 2.39174e-12 Query: 1 VVGFGNRYPKHVHHRGASIPK---NKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 21.1718 bits (43), Expect = 2.39174e-12 Query: 170 DGFHDVRTNYNYTEP 214 |
|||
POPTR_0014s12170 | 4.02e-12 | 44.44% | POPTR_0014s12170.1 |
|
HSP 1
Score: 65.4698 bits (158), Expect = 4.02478e-12 Query: 1 VVGFGNRYPKHVHHRGASIPK---NKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 HSP 2 Score: 22.7126 bits (47), Expect = 4.02478e-12 Query: 164 KHDGFHDVRTNYNYTEP 214 |
|||
POPTR_0003s14740 | 6.93e-12 | 50.00% | POPTR_0003s14740.1 |
|
HSP 1
Score: 67.3958 bits (163), Expect = 6.92906e-12 Query: 1 VVGFGNRYPKHVHHRGASIPK---NKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 |
|||
Loading...

TrEMBL homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
Q6QLN2_POPTM | 1.60e-38 | 88.68% | Endo-1,4-beta-glucanase OS=Populus tremu... |
|
HSP 1
Score: 116.316 bits (290), Expect = 1.60402e-38 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.781 bits (164), Expect = 1.60402e-38 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
Q6DMM4_9ROSI | 1.60e-38 | 88.68% | Cel9A OS=Populus tremula x Populus tremu... |
|
HSP 1
Score: 116.316 bits (290), Expect = 1.60402e-38 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.781 bits (164), Expect = 1.60402e-38 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
B9NBR6_POPTR | 1.60e-38 | 88.68% | Putative uncharacterized protein POPTRKO... |
|
HSP 1
Score: 116.316 bits (290), Expect = 1.60402e-38 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.781 bits (164), Expect = 1.60402e-38 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
D3JWK8_9ROSI | 2.72e-38 | 88.68% | Membrane-bound endo-beta-1,4-glucanase O... |
|
HSP 1
Score: 116.316 bits (290), Expect = 2.72261e-38 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.0106 bits (162), Expect = 2.72261e-38 Query: 167 HDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
A5BUX9_VITVI | 4.62e-38 | 86.79% | Putative uncharacterized protein OS=Viti... |
|
HSP 1
Score: 114.39 bits (285), Expect = 4.62143e-38 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 68.1662 bits (165), Expect = 4.62143e-38 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
D7TGI4_VITVI | 4.63e-38 | 86.79% | Whole genome shotgun sequence of line PN... |
|
HSP 1
Score: 114.39 bits (285), Expect = 4.63298e-38 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 68.1662 bits (165), Expect = 4.63298e-38 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
B9GK28_POPTR | 1.02e-37 | 90.57% | Endo-1,4-beta-glucanase OS=Populus trich... |
|
HSP 1
Score: 116.701 bits (291), Expect = 1.02183e-37 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 64.6994 bits (156), Expect = 1.02183e-37 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
A0ZNJ7_PYRCO | 1.44e-36 | 88.68% | Cellulase1 OS=Pyrus communis GN=PcCL1 PE... |
|
HSP 1
Score: 110.153 bits (274), Expect = 1.43858e-36 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.3958 bits (163), Expect = 1.43858e-36 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
Q8GTP6_PYRCO | 1.44e-36 | 88.68% | Endo-1,4-beta-D-glucanase OS=Pyrus commu... |
|
HSP 1
Score: 110.153 bits (274), Expect = 1.43861e-36 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.3958 bits (163), Expect = 1.43861e-36 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
Q2HSS5_MEDTR | 4.14e-36 | 88.68% | Glycoside transferase, six-hairpin, subg... |
|
HSP 1
Score: 111.694 bits (278), Expect = 4.14274e-36 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 64.3142 bits (155), Expect = 4.14274e-36 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
Loading...

Grape (V. vinifera) homologs
Analysis Date: 01-25-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
GSVIVT01023102001 | 2.47e-40 | 86.79% | GSVIVT01023102001 assembled CDS |
|
HSP 1
Score: 114.39 bits (285), Expect = 2.46956e-40 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 68.1662 bits (165), Expect = 2.46956e-40 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
GSVIVT01006265001 | 2.55e-29 | 62.71% | GSVIVT01006265001 assembled CDS |
|
HSP 1
Score: 95.1301 bits (235), Expect = 2.55234e-29 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 50.447 bits (119), Expect = 2.55234e-29 Query: 170 DGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
GSVIVT01028042001 | 1.14e-12 | 47.62% | GSVIVT01028042001 assembled CDS |
|
HSP 1
Score: 67.781 bits (164), Expect = 1.13805e-12 Query: 1 VVGFGNRYPKHVHHRGASIP---KNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 HSP 2 Score: 21.557 bits (44), Expect = 1.13805e-12 Query: 164 KHDGFHDVRTNYNYTEPT 217 |
|||
GSVIVT01009881001 | 4.27e-12 | 47.46% | GSVIVT01009881001 assembled CDS |
|
HSP 1
Score: 67.3958 bits (163), Expect = 4.26966e-12 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 |
|||
GSVIVT01037210001 | 1.99e-11 | 46.88% | GSVIVT01037210001 assembled CDS |
|
HSP 1
Score: 58.9214 bits (141), Expect = 1.9922e-11 Query: 1 VVGFGNRYPKHVHHRGASIP---KNKVKYNCKGGWK-WRDTSKPNPNTIVGAMVAGPVQTRRFP 180 HSP 2 Score: 26.1794 bits (56), Expect = 1.9922e-11 Query: 164 KHDGFHDVRTNYNYTEP 214 |
|||
GSVIVT01019420001 | 2.58e-11 | 44.44% | GSVIVT01019420001 assembled CDS |
|
HSP 1
Score: 59.3066 bits (142), Expect = 2.58302e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKV---KYNCKGGW-KWRDTSKPNPNTIVGAMVAGPVQTRRF 177 HSP 2 Score: 25.409 bits (54), Expect = 2.58302e-11 Query: 170 DGFHDVRTNYNYTEPT 217 |
|||
GSVIVT01018793001 | 3.61e-11 | 52.83% | GSVIVT01018793001 assembled CDS |
|
HSP 1
Score: 64.3142 bits (155), Expect = 3.61449e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 |
|||
GSVIVT01012043001 | 3.46e-10 | 42.11% | GSVIVT01012043001 assembled CDS |
|
HSP 1
Score: 50.0618 bits (118), Expect = 3.45562e-10 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYN---CKGGWK-WRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 30.8018 bits (68), Expect = 3.45562e-10 Query: 164 KHDGFHDVRTNYNYTEPTI 220 |
|||
GSVIVT01019523001 | 1.64e-09 | 45.61% | GSVIVT01019523001 assembled CDS |
|
HSP 1
Score: 55.0694 bits (131), Expect = 1.63887e-09 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVK---YNCKGGW-KWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 23.483 bits (49), Expect = 1.63887e-09 Query: 167 HDGFHDVRTNYNYTEP 214 |
|||
GSVIVT01035481001 | 2.59e-09 | 43.55% | GSVIVT01035481001 assembled CDS |
|
HSP 1
Score: 58.151 bits (139), Expect = 2.59032e-09 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWK---WRDTSKPNPNTIVGAMVAGPVQTRRF 177 |
|||
Loading...

Arabidopsis (A. thaliana) homologs
Analysis Date: 02-10-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
Query: Vaccinium_corymbosum_v1_Contig678
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
AT5G49720.1 | 5.58e-34 | 88.68% | glycosyl hydrolase 9A1 | chr5:20197765-... |
|
HSP 1
Score: 112.079 bits (279), Expect = 5.57555e-34 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 49.6766 bits (117), Expect = 5.57555e-34 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSV--GIDKNTMFSAV 310 |
|||
AT4G24260.1 | 5.74e-30 | 69.81% | glycosyl hydrolase 9A3 | chr4:12577871-... |
|
HSP 1
Score: 80.8777 bits (198), Expect = 5.7368e-30 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 67.3958 bits (163), Expect = 5.7368e-30 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSV-GIDKNTMFSAV 310 |
|||
AT1G65610.1 | 2.17e-21 | 60.38% | Six-hairpin glycosidases superfamily pr... |
|
HSP 1
Score: 77.7962 bits (190), Expect = 2.1686e-21 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 HSP 2 Score: 41.5874 bits (96), Expect = 2.1686e-21 Query: 164 KHDGFHDVRTNYNYTEPTIXXXXXXXXXXXXXSGEKSVGIDKNTMFSAV 310 |
|||
AT1G75680.1 | 6.11e-12 | 50.85% | glycosyl hydrolase 9B7 | chr1:28417215-... |
|
HSP 1
Score: 67.3958 bits (163), Expect = 6.10989e-12 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRF 177 |
|||
AT1G19940.1 | 7.98e-12 | 52.83% | glycosyl hydrolase 9B5 | chr1:6918323-6... |
|
HSP 1
Score: 67.0106 bits (162), Expect = 7.97977e-12 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGP 159 |
|||
AT4G02290.1 | 2.85e-11 | 42.86% | glycosyl hydrolase 9B13 | chr4:1002654-... |
|
HSP 1
Score: 62.3882 bits (150), Expect = 2.84973e-11 Query: 1 VVGFGNRYPKHVHHRGASIP---KNKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 HSP 2 Score: 22.7126 bits (47), Expect = 2.84973e-11 Query: 164 KHDGFHDVRTNYNYTEP 214 |
|||
AT1G22880.2 | 3.03e-11 | 44.44% | cellulase 5 | chr1:8096103-8097539 FORW... |
|
HSP 1
Score: 65.0846 bits (157), Expect = 3.03231e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYN---CKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 |
|||
AT1G22880.1 | 3.03e-11 | 44.44% | cellulase 5 | chr1:8095770-8097539 FORW... |
|
HSP 1
Score: 65.0846 bits (157), Expect = 3.03231e-11 Query: 1 VVGFGNRYPKHVHHRGASIPKNKVKYN---CKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 |
|||
AT1G02800.1 | 3.35e-10 | 42.86% | cellulase 2 | chr1:613386-616103 REVERS... |
|
HSP 1
Score: 61.6178 bits (148), Expect = 3.35261e-10 Query: 1 VVGFGNRYPKHVHHRGASIPKNKV---KYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 |
|||
AT1G23210.1 | 4.38e-10 | 41.27% | glycosyl hydrolase 9B6 | chr1:8240174-8... |
|
HSP 1
Score: 61.2326 bits (147), Expect = 4.37864e-10 Query: 1 VVGFGNRYPKHVHHRGASIPK---NKVKYNCKGGWKWRDTSKPNPNTIVGAMVAGPVQTRRFP 180 |
|||
| Related info for Vaccinium_corymbosum_v1_Contig678 |
|---|