CF810570

Information for CF810570

NameCF810570
AccessionID735
Length678 bp
TypeEST
Organism highbush blueberry (Vaccinium corymbosum)
Library LIBEST_014530 cDNA cold acclimated Bluecrop library
Is singlet in Vaccinium corymbosum unigene v1
NCBI Accession CF810570
Sequence
CATTCTCAACCATCATCTTTGACAACTGCTTCGTCGGAAATCGTCTCTGTCAAAGATAGC
CAATCATCCCAACTGATTGGCCTTTCCGAAGTGGTTGCATCTGAAGCTGCAACTTTCGCA
GGCGGTTCAGAGGCCCTTCCTGAAAAAAAGGTGTCTGGTTTGGAAGATGCAATTTCAAAA
CTTGATATGAAGTTAGAAAAGTTAAATATTTCTCGTCATCACCGGGCTGTTATTTTTCCT
GATCATGTCCAAGTCCCTGAACATATTAAGAACGGATTGACTTTTGGAAGTCTGGATTTT
GAGCAGAGTCTGAGCTGTGGTAATGACACTGATGACTCTAATGGCTCTTTGCCTGTCCCT
GAATTCCTTAATGGTAATGACAAAGCTGAGAAGGAAACTTCATTGAGCAACCTAAATGTA
TCCTCAAGTTCTCGAGAAGGAGATTATCATGATAATCTACATTCTCTGCCACATGTGCCC
AATAGTGAGGCACATCTGAAAGACAATGTTTCATCGGGCCCAGCTCCACTATATGACCAT
CCGAAACAAGATATTATGTTTTCTCAAGGAGGACCTCAGTATCCATTTGTTCACATGGGN
CCCTCACTATGGCTTTCCTTTCATTCAACCCTTGCTAGGGAGCCAGCATGTACAATGTGA
AGGAACTGAAACTCANAA
Download sequence in fasta format

InterProScan Analysis

Analysis Date: 01-18-2011 (InterProScan analysis for Vaccinium corymbosum unigene v1)
SEQUENCE: CF810570_1_ORF1 CRC64: 352EF47B15A55AA7 LENGTH: 219 aa
noIPR
unintegrated
unintegrated
seg [134-144]? NA seg seg seg
SEQUENCE: CF810570_6_ORF3 CRC64: 15CFD100D43181A5 LENGTH: 69 aa
noIPR
unintegrated
unintegrated
seg [2-18]? NA seg seg seg

Poplar (P. trichocarpa) homologs

Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Query: CF810570
Best 10 Hits Shown

Match Name E value Identity Description
POPTR_0014s167809.53e-1632.63%POPTR_0014s16780.1
HSP 1 
Score: 73.559 bits (179), Expect = 9.52948e-16
Identity = 62/190 (32.63%), Postives = 88/190 (46.32%), Query Frame = 1
Query:   58 SQSSQLIGLSEVVASEAATFAGGSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLDFEQSL-SCGNDTDDSN-GSLPVPEFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            +Q S   GLS +  S     A G  + P   V   E+A +KL  KLE+L++ +    VI P H+ VPE  +  L+FGS D    + SC     +S+  S PV E     +++ +E             EG+Y D+  S  HVP  +   + +VSS   P Y+  KQ+     GG QY  VH  PS    F
Sbjct:  359 AQESGTAGLSAI--SNIPLEASG-HSQPSSGVFDSEEATAKLQKKLEELHLPQRQN-VIIPHHIHVPESERTKLSFGSFDASFGVPSCHVSPPESDKSSTPVSETSQVIEESVEEQAQSKQNTLLTAEEGNYPDHPQSPSHVP-GKLSAEGDVSSNAVPDYE-SKQEAALLSGGHQYSVVHTSPSYSFGF 542

HSP 2 
Score: 27.335 bits (59), Expect = 9.52948e-16
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTET 673
            P Y F F+ P+LGSQ    E +E+
Sbjct:  536 PSYSFGFVPPMLGSQIAPFENSES 559
POPTR_0002s223202.71e-1532.07%POPTR_0002s22320.1
HSP 1 
Score: 74.3294 bits (181), Expect = 2.71331e-15
Identity = 59/184 (32.07%), Postives = 88/184 (47.83%), Query Frame = 1
Query:   58 SQSSQLIGLSEVVASEAATFAGGSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLD--FEQSLSCGNDTDDSNGSLPVPEFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGP 603
            +Q S   GLS++ ++     +G S+A     V   E+A +KL  KLE+L++ +    VI P H+ VPE  +N L+FGS D  F  + S  +  + +  S PV E   G ++  +E             EG Y D+  S  HVP +    + + SS   P Y+  KQ+     GG QY  VH  P
Sbjct:  356 AQESGTAGLSDI-SNIPLESSGHSQA--SSGVLDSEEATAKLQKKLEELHLPQRQH-VIIPHHIHVPESERNKLSFGSFDASFGVTSSYVSGAESNKSSTPVSETSQGIEEPMEEQAESNQNTPVTAEEGIYPDHPQSPSHVPGN-LSAEGDASSNTVPDYE-SKQEAALLSGGHQYSVVHTSP 533

HSP 2 
Score: 25.0238 bits (53), Expect = 2.71331e-15
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTET 673
            P Y F  + P+LGSQ +  E +E+
Sbjct:  533 PGYSFGLVPPMLGSQIMPFENSES 556

Peach (P. persica) homologs

Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Query: CF810570
Best 10 Hits Shown

Match Name E value Identity Description
ppa001246m 2.64e-1428.89%ppa001246m
HSP 1 
Score: 67.3958 bits (163), Expect = 2.64425e-14
Identity = 52/180 (28.89%), Postives = 81/180 (45.00%), Query Frame = 1
Query:   94 VASE--AATFAGGSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLDFEQSLSCG--NDTDDSNGSLPVPEFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            VASE  A +    S++     V   E+A SKL  KLE+L++ +  + VI P+H+ VPE  +  L+FGS     +++ G  +  +    S P  E     ++A +E             E DY D+  S  HVP + +  + +VSS      +  K D     GG Q+   H  P+    F
Sbjct:  353 VASEVPADSVKAPSQSQSVSSVLDSEEATSKLQRKLEELHLPQR-KTVILPNHIHVPESERTKLSFGSFGATFAVTTGYVSGPETDKSSTPRSETSQVIEEAVEEQLSSNQNALATANEDDYPDHPQSPTHVPENISSGEVDVSSSATQGQNESKHDTALPSGGHQFSVAHTSPNYSFGF 531

HSP 2 
Score: 28.1054 bits (61), Expect = 2.64425e-14
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTET 673
            P+Y F F+ P+LGSQ    E +E+
Sbjct:  525 PNYSFGFVPPILGSQLAPFENSES 548

TrEMBL homologs

Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Query: CF810570
Best 10 Hits Shown

Match Name E value Identity Description
D7UAL3_VITVI5.82e-1833.33%
Whole genome shotgun sequence of line PN...
HSP 1 
Score: 86.2705 bits (212), Expect = 5.82025e-18
Identity = 72/216 (33.33%), Postives = 99/216 (45.83%), Query Frame = 1
Query:    4 SQPSSLTTASSEIV----SVKDSQSS-QLIGLSEVVASEA--ATFAG--GSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLDFEQSLSCGNDTDDSNGSLPVP-EFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            S+  SL+T    ++    S  +SQSS Q  G S+   SE   AT      S+ + E  VS LE+A S L      ++ +RH   VIF +H+Q+PE +KNGL FGS D   SL             P P E    N +  K             +E DY D   S PH P + +    +VSSG  P +D  KQ+++   GGP +P V   P+    F
Sbjct:  293 SESLSLSTHDDSLIIDSSSTHESQSSLQFTGPSKAPDSETEVATMIAEDNSQLITESNVSVLEEATSNLH-----ISDARH---VIFRNHLQIPEALKNGLVFGSFDSSFSLGSKYANGPDVEKSPTPAESSQENIEITKGPSPSNQSVASTAQEEDYPDQPQSPPHAPENLSPPVGSVSSGAVPKHDQSKQEMLLPTGGPHFPVVQPLPNYSFGF 500

HSP 2 
Score: 29.261 bits (64), Expect = 5.82025e-18
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTE 670
            P+Y F F+ P+LGS  VQ EG +
Sbjct:  494 PNYSFGFMPPMLGSSLVQFEGPD 516
A5AXX2_VITVI1.28e-1733.33%
Putative uncharacterized protein OS=Viti...
HSP 1 
Score: 85.1149 bits (209), Expect = 1.27531e-17
Identity = 72/216 (33.33%), Postives = 99/216 (45.83%), Query Frame = 1
Query:    4 SQPSSLTTASSEIV----SVKDSQSS-QLIGLSEVVASEA--ATFAG--GSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLDFEQSLSCGNDTDDSNGSLPVP-EFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            S+  SL+T    ++    S  +SQSS Q  G S+   SE   AT      S+ + E  VS LE+A S L      ++ +RH   VIF +H+Q+PE +KNGL FGS D   SL             P P E    N +  K             +E DY D   S PH P + +    +VSSG  P +D  KQ+++   GGP +P V   P+    F
Sbjct:  424 SESLSLSTHDDSLIIDSSSNHESQSSLQFTGPSKAPDSETEVATMIAEDNSQLITESNVSVLEEATSNLH-----ISDARH---VIFRNHLQIPEALKNGLVFGSFDSSFSLGSKYANGPDVEKSPTPAESSQENIEITKGPSPSNQSVASTAQEEDYPDQPQSPPHAPENLSPPVGSVSSGAVPKHDQSKQEMLLPTGGPHFPVVQPLPNYSFGF 631

HSP 2 
Score: 29.261 bits (64), Expect = 1.27531e-17
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTE 670
            P+Y F F+ P+LGS  VQ EG +
Sbjct:  625 PNYSFGFMPPMLGSSLVQFEGPD 647
D7TD97_VITVI2.29e-1632.68%
Whole genome shotgun sequence of line PN...
HSP 1 
Score: 82.0333 bits (201), Expect = 2.28804e-16
Identity = 67/205 (32.68%), Postives = 88/205 (42.93%), Query Frame = 1
Query:   13 SSLTTASSEIVSVKDSQSSQLIGLSEVVASEAATFAGGSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLD--FEQSLSCGNDTDDSNGSLPVPEFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            SS    +SEI SV     +Q   +S  + SE A         P+KK+ GL                SR  R VI P+H+ VPE  + GL FGS    F  SL    D +    S P  E   G ++  +E             EGDY D+  S PHV  + +  + ++SS  AP YD  KQ+I    GG QY  VH  P+    F
Sbjct:  368 SSGAAVTSEIPSVSAESVTQTQPVSGDLDSEEAN------PKPQKKLEGLH---------------SRARRHVIIPNHIHVPEAERTGLNFGSFTTGFGVSLIDAYDPESDKTSTPQSETSQGIEETVEEHSSSNQNVLATAEEGDYPDHPESPPHVSENISSGEGDISSSSAPEYD-SKQEIALPPGGHQYSTVHTSPNYSFGF 550

HSP 2 
Score: 28.1054 bits (61), Expect = 2.28804e-16
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTET 673
            P+Y F F+ P+LGSQ    E +E+
Sbjct:  544 PNYSFGFVPPILGSQLAPFESSES 567
B9T1U6_RICCO9.56e-1433.33%
Putative uncharacterized protein OS=Rici...
HSP 1 
Score: 75.8702 bits (185), Expect = 9.55526e-14
Identity = 56/168 (33.33%), Postives = 76/168 (45.24%), Query Frame = 1
Query:  130 EALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLD----FEQSLSCGNDTDDSNGSLPVPEFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            ++ P  K    E+A SKL  KLE+L+  +    VI P+H+ VPE  +  L+FGS D       SL  G  +D S  S P+ E   G D+  +E             EG Y D+  S  HV +     + +VSS   P Y   KQ+     GG QY  VH  P+    F
Sbjct:  123 QSQPLSKALDSEEATSKLQKKLEELHFPQRQH-VIIPNHIHVPESERTKLSFGSFDASFGITTSLVGGPGSDKS--STPLSETSEGIDETVEEHAASNQDTMETVEEGAYPDHPESPSHV-SGNLSTEGDVSSSAVPDYSESKQETALMSGGQQYSVVHTTPNYSFGF 286

HSP 2 
Score: 25.409 bits (54), Expect = 9.55526e-14
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTET 673
            P+Y F F+ P+L SQ    E +E+
Sbjct:  280 PNYSFGFVPPVLSSQIATFENSES 303

Grape (V. vinifera) homologs

Analysis Date: 01-25-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Query: CF810570
Best 10 Hits Shown

Match Name E value Identity Description
GSVIVT010147300012.75e-2033.33%GSVIVT01014730001 assembled CDS
HSP 1 
Score: 86.2705 bits (212), Expect = 2.7484e-20
Identity = 72/216 (33.33%), Postives = 99/216 (45.83%), Query Frame = 1
Query:    4 SQPSSLTTASSEIV----SVKDSQSS-QLIGLSEVVASEA--ATFAG--GSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLDFEQSLSCGNDTDDSNGSLPVP-EFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            S+  SL+T    ++    S  +SQSS Q  G S+   SE   AT      S+ + E  VS LE+A S L      ++ +RH   VIF +H+Q+PE +KNGL FGS D   SL             P P E    N +  K             +E DY D   S PH P + +    +VSSG  P +D  KQ+++   GGP +P V   P+    F
Sbjct:  293 SESLSLSTHDDSLIIDSSSTHESQSSLQFTGPSKAPDSETEVATMIAEDNSQLITESNVSVLEEATSNLH-----ISDARH---VIFRNHLQIPEALKNGLVFGSFDSSFSLGSKYANGPDVEKSPTPAESSQENIEITKGPSPSNQSVASTAQEEDYPDQPQSPPHAPENLSPPVGSVSSGAVPKHDQSKQEMLLPTGGPHFPVVQPLPNYSFGF 500

HSP 2 
Score: 29.261 bits (64), Expect = 2.7484e-20
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTE 670
            P+Y F F+ P+LGS  VQ EG +
Sbjct:  494 PNYSFGFMPPMLGSSLVQFEGPD 516
GSVIVT010301210011.08e-1832.68%GSVIVT01030121001 assembled CDS
HSP 1 
Score: 82.0333 bits (201), Expect = 1.08011e-18
Identity = 67/205 (32.68%), Postives = 88/205 (42.93%), Query Frame = 1
Query:   13 SSLTTASSEIVSVKDSQSSQLIGLSEVVASEAATFAGGSEALPEKKVSGLEDAISKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLD--FEQSLSCGNDTDDSNGSLPVPEFLNGNDKAEKETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPFVHMGPSLWLSF 621
            SS    +SEI SV     +Q   +S  + SE A         P+KK+ GL                SR  R VI P+H+ VPE  + GL FGS    F  SL    D +    S P  E   G ++  +E             EGDY D+  S PHV  + +  + ++SS  AP YD  KQ+I    GG QY  VH  P+    F
Sbjct:  368 SSGAAVTSEIPSVSAESVTQTQPVSGDLDSEEAN------PKPQKKLEGLH---------------SRARRHVIIPNHIHVPEAERTGLNFGSFTTGFGVSLIDAYDPESDKTSTPQSETSQGIEETVEEHSSSNQNVLATAEEGDYPDHPESPPHVSENISSGEGDISSSSAPEYD-SKQEIALPPGGHQYSTVHTSPNYSFGF 550

HSP 2 
Score: 28.1054 bits (61), Expect = 1.08011e-18
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  602 PHYGFPFIQPLLGSQHVQCEGTET 673
            P+Y F F+ P+LGSQ    E +E+
Sbjct:  544 PNYSFGFVPPILGSQLAPFESSES 567

Arabidopsis (A. thaliana) homologs

Analysis Date: 02-10-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Query: CF810570
Best 10 Hits Shown

Match Name E value Identity Description
AT3G07660.1 6.05e-0727.37%
Kinase-related protein of unknown funct...
HSP 1 
Score: 51.2174 bits (121), Expect = 6.05003e-07
Identity = 52/190 (27.37%), Postives = 82/190 (43.16%), Query Frame = 1
Query:   46 SVKDSQSSQLIGLSEVVASEAATFAGGSEALP-EKKVSGLEDAI------SKLDMKLEKLNISRHHRAVIFPDHVQVPEHIKNGLTFGSLDFEQSLSCGNDTDDSNGSLPVPEFLNGNDKAEK--ETXXXXXXXXXXXREGDYHDNLHSLPHVPNSEAHLKDNVSSGPAPLYDHPKQDIMFSQGGPQYPF 588
            S+K+ +   ++  +    S A++  G + A+P E     +EDA       S+L  +LE L I R H  VI P+H+ VPE  +  L+FGS D + S++        +     P   N  +  E   E            +E D +    S   VP++ A  + N ++  AP YD  KQ+ M      Q  F
Sbjct:  304 SIKEWKPKPVVNHNTTQGSGASS-TGETLAVPTEASDKSVEDATPSAEATSRLQRQLEDLQIQRQH--VIIPNHILVPEAERTKLSFGSFDADFSITSSTVAFPQSEKRSAPLSHNSQEVEESFAEEEFRHPTVHSIEKEEDGNVYSESPSQVPDNMAG-EGNTATNTAPEYDVTKQENMLESESNQNSF 489
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