CF810848
Information for CF810848
| Name | CF810848 |
|---|---|
| Accession | ID749 |
| Length | 597 bp |
| Type | EST |
| Organism | highbush blueberry (Vaccinium corymbosum) |
| Library |
LIBEST_014530 cDNA cold acclimated Bluecrop library |
| Is singlet in |
Vaccinium corymbosum unigene v1 |
| NCBI Accession | CF810848 |
| Sequence |
|---|
| AGATTTCAGAATCTTTCATCTGTTGCGTCTGCCTGGATCTTCTCTATAAGCCCATTGTTC TGGCTTGTGGCCATGTCTCCTGTTTCTGGTGTGTCCATAGAGCCATGAGTAATCTACATG AGTCTCATTGTCCAATTTGTAGGCAACCATATGGTCATTTTCCAACTATTTGTCAGATGC TTCATTTCTTGCTTTTAAAGATGTATCCAGTTGCCTACAAGACCAGGGAAACTTACATGC TAGAAGAGGAAAAGGAGATTGGCTGCTTCTCACCTAAGGTTGATGATCTTCTTCGTTCTT CGCAGACTAACGAAGAATCGAATCATCTTGATGATCTGGCACAATCCTTTACCTATGGTG ATGGGGAAAGAAGCCATATCAGAAGTCCAGGGCAGGTTTCAATTGTGGATGTATCATGTG CTACATGCAAGCAACTACTCTTTCAGCCTGTTGTTCTTAATTGTGGCCATGTATATTGTG AAGCTTGCATCGTGCTAACTGGTGAGGCAATTAGATGTCAAGTTTGCCAAAGCCCACATC CAAGTGGTTTTCCAAAAGTTTGTTTGGAACTTGATCATTTCCTGGAAGAACAGTTTN |
Download sequence in fasta format





GO terms assigned to this feature
| Accession | Category | Term |
|---|---|---|
| GO:0005515 | molecular_function | protein binding |
| GO:0008270 | molecular_function | zinc ion binding |
InterProScan Analysis
Analysis Date: 01-18-2011
(InterProScan analysis for Vaccinium corymbosum unigene v1)
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Poplar (P. trichocarpa) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Query: CF810848
Best 10 Hits Shown
Query: CF810848
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
POPTR_0003s17710 | 4.03e-58 | 47.70% | POPTR_0003s17710.1 |
|
HSP 1
Score: 221.09 bits (562), Expect = 4.02584e-58 Query: 9 ESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEE--------------SNHLDDLAQSFTYGDGERSHI------RSPG----------------------QVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAI-RCQVCQSPHPSGFPKVCLELDHFLEEQF 596 HSP 2 Score: 58.151 bits (139), Expect = 4.51346e-09 Query: 18 ICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICR--QPYGHFPTICQML-HFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDDLAQSFTYGDGERSHIR----SPGQVSIVD--VSCATCKQLLFQPVVLNCGHVYCEAC 488 |
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POPTR_0001s14590 | 7.59e-57 | 47.35% | POPTR_0001s14590.1 |
|
HSP 1
Score: 216.853 bits (551), Expect = 7.59241e-57 Query: 15 FICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEE----SNHLDDLAQS---------FTYGDGERSHIRSPGQV-------------------------------------SIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAI-RCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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POPTR_0002s24330 | 2.99e-53 | 55.62% | POPTR_0002s24330.1 |
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HSP 1
Score: 204.912 bits (520), Expect = 2.98562e-53 Query: 63 ACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDDLAQSFTYGDGERSHIRSPGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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POPTR_0012s07000 | 5.52e-07 | 32.91% | POPTR_0012s07000.4 |
|
HSP 1
Score: 51.2174 bits (121), Expect = 5.51733e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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POPTR_0012s07000 | 5.52e-07 | 32.91% | POPTR_0012s07000.3 |
|
HSP 1
Score: 51.2174 bits (121), Expect = 5.51733e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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POPTR_0012s07000 | 5.52e-07 | 32.91% | POPTR_0012s07000.2 |
|
HSP 1
Score: 51.2174 bits (121), Expect = 5.51733e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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POPTR_0012s07000 | 5.52e-07 | 32.91% | POPTR_0012s07000.1 |
|
HSP 1
Score: 51.2174 bits (121), Expect = 5.51733e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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Peach (P. persica) homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Query: CF810848
Best 10 Hits Shown
Query: CF810848
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
ppa016728m | 6.55e-71 | 59.72% | ppa016728m |
|
HSP 1
Score: 263.077 bits (671), Expect = 6.54623e-71 Query: 3 ISESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEE------------SNHLDDLAQSFTYGDGERSHI-----RSPGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGE-AIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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ppa008328m | 2.28e-23 | 65.22% | ppa008328m |
|
HSP 1
Score: 105.145 bits (261), Expect = 2.28144e-23 Query: 393 QVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAI-RCQVCQSPHPSGFPKVCLELDHFLEEQF 596 HSP 2 Score: 58.151 bits (139), Expect = 3.19828e-09 Query: 18 ICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGH-FPTICQMLHFLLLKMYPVAYKTRETYMLEE 248 |
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ppa005453m | 3.91e-07 | 33.33% | ppa005453m |
|
HSP 1
Score: 51.2174 bits (121), Expect = 3.90963e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRE 230 |
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ppa004836m | 3.91e-07 | 33.33% | ppa004836m |
|
HSP 1
Score: 51.2174 bits (121), Expect = 3.90963e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRE 230 |
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Swissprot homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Query: CF810848
Best 10 Hits Shown
Query: CF810848
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
PRT1_ARATH | 7.54e-57 | 47.23% | E3 ubiquitin-protein ligase PRT1 OS=Arab... |
|
HSP 1
Score: 219.935 bits (559), Expect = 7.54022e-57 Query: 3 ISESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDD-------------LAQSFTYGD------------------GERSHIRS---PGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIV---LTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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BFAR_RAT | 9.35e-07 | 35.71% | Bifunctional apoptosis regulator OS=Ratt... |
|
HSP 1
Score: 53.5286 bits (127), Expect = 9.34646e-07 Query: 357 GDGERSHIRSPG-QVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVL---TGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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TrEMBL homologs
Analysis Date: 01-18-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Query: CF810848
Best 10 Hits Shown
Query: CF810848
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
B9S532_RICCO | 8.01e-64 | 56.60% | Putative uncharacterized protein OS=Rici... |
|
HSP 1
Score: 246.899 bits (629), Expect = 8.00641e-64 Query: 3 ISESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDDLAQ-----------SFTYGDGERSHIRSPGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACI---VLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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D7U3J4_VITVI | 2.85e-61 | 50.61% | Whole genome shotgun sequence of line PN... |
|
HSP 1
Score: 238.424 bits (607), Expect = 2.84763e-61 Query: 30 CLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVD----------------------------DLLRSSQTNEESNHLDDL------------------------AQSFTYGDGERSHIRSP-----GQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACI-VLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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B9GQH3_POPTR | 2.85e-61 | 50.40% | Predicted protein (Fragment) OS=Populus ... |
|
HSP 1
Score: 238.424 bits (607), Expect = 2.84763e-61 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSP-----KVDDLLRSSQTNEESNHLDDLAQSFTYGD--GERSHIRSPGQVS--------------------------------------------IVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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A9PEV7_POPTR | 2.85e-61 | 50.40% | Putative uncharacterized protein OS=Popu... |
|
HSP 1
Score: 238.424 bits (607), Expect = 2.84763e-61 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSP-----KVDDLLRSSQTNEESNHLDDLAQSFTYGD--GERSHIRSPGQVS--------------------------------------------IVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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Q6K9N9_ORYSJ | 5.94e-59 | 53.92% | Os02g0621500 protein OS=Oryza sativa sub... |
|
HSP 1
Score: 230.72 bits (587), Expect = 5.93767e-59 Query: 15 FICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTN---------EESNHLDDLAQSFTYGDGERSHIRSPGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACI-VLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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B8AFI4_ORYSI | 5.94e-59 | 53.92% | Putative uncharacterized protein OS=Oryz... |
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HSP 1
Score: 230.72 bits (587), Expect = 5.93767e-59 Query: 15 FICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTN---------EESNHLDDLAQSFTYGDGERSHIRSPGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACI-VLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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B9H0A3_POPTR | 4.70e-56 | 47.70% | Predicted protein OS=Populus trichocarpa... |
|
HSP 1
Score: 221.09 bits (562), Expect = 4.7047e-56 Query: 9 ESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEE--------------SNHLDDLAQSFTYGDGERSHI------RSPG----------------------QVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGEAI-RCQVCQSPHPSGFPKVCLELDHFLEEQF 596 HSP 2 Score: 58.151 bits (139), Expect = 5.27455e-07 Query: 18 ICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICR--QPYGHFPTICQML-HFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDDLAQSFTYGDGERSHIR----SPGQVSIVD--VSCATCKQLLFQPVVLNCGHVYCEAC 488 |
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D7L5T1_ARALY | 3.05e-55 | 45.23% | Putative uncharacterized protein OS=Arab... |
|
HSP 1
Score: 218.394 bits (555), Expect = 3.0495e-55 Query: 3 ISESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSS-------------------QTNEESNHLDDLAQSFTYG------------DGERSHI---------RSPGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIV---LTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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A9TLB7_PHYPA | 5.40e-44 | 39.91% | Predicted protein (Fragment) OS=Physcomi... |
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HSP 1
Score: 181.03 bits (458), Expect = 5.39537e-44 Query: 9 ESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDDLAQSFTYGDGERSHIRSP-------------------GQ-----------------VSIVDVSCATCKQLLFQPVVLNCGHVYCEACIVLTGE-AIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 HSP 2 Score: 63.1586 bits (152), Expect = 1.63964e-08 Query: 21 CCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPY-GHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKV 281 |
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B9RWJ2_RICCO | 1.09e-36 | 38.84% | Putative uncharacterized protein OS=Rici... |
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HSP 1
Score: 156.762 bits (395), Expect = 1.08965e-36 Query: 105 MSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTN---------------------------------------EESNHLD---DLAQSFTYGDGERSHIRSPGQVSIV-----------------DVSCATCKQLLFQPVVLNCGHVYCEACIVL-TGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 HSP 2 Score: 60.077 bits (144), Expect = 1.38804e-07 Query: 21 CCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICR--QPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDD--LLRSSQTNEESNHLDDLAQSFTYGDGERSHIR----SPGQVSIVD--VSCATCKQLLFQPVVLNCGHVYCEAC 488 |
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Grape (V. vinifera) homologs
Analysis Date: 01-25-2011 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Query: CF810848
Best 10 Hits Shown
Query: CF810848
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
GSVIVT01028643001 | 1.48e-63 | 50.61% | GSVIVT01028643001 assembled CDS |
|
HSP 1
Score: 238.424 bits (607), Expect = 1.47803e-63 Query: 30 CLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVD----------------------------DLLRSSQTNEESNHLDDL------------------------AQSFTYGDGERSHIRSP-----GQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACI-VLTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 |
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GSVIVT01007961001 | 1.50e-07 | 32.91% | GSVIVT01007961001 assembled CDS |
|
HSP 1
Score: 52.373 bits (124), Expect = 1.50223e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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Arabidopsis (A. thaliana) homologs
Analysis Date: 02-10-2011 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Query: CF810848
Best 10 Hits Shown
Query: CF810848
Best 10 Hits Shown
| Match Name | E value | Identity | Description |
|---|---|---|---|
AT3G24800.1 | 7.90e-58 | 47.23% | proteolysis 1 | chr3:9055653-9057795 FO... |
|
HSP 1
Score: 219.935 bits (559), Expect = 7.9027e-58 Query: 3 ISESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQMLHFLLLKMYPVAYKTRETYMLEEEKEIGCFSPKVDDLLRSSQTNEESNHLDD-------------LAQSFTYGD------------------GERSHIRS---PGQVSIVDVSCATCKQLLFQPVVLNCGHVYCEACIV---LTGEAIRCQVCQSPHPSGFPKVCLELDHFLEEQF 596 HSP 2 Score: 53.1434 bits (126), Expect = 1.27937e-07 Query: 9 ESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICR--QPYGHFPTICQMLHFLLLKMYPVAYKTRET 233 |
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AT1G18660.1 | 2.18e-07 | 34.18% | zinc finger (C3HC4-type RING finger) fa... |
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HSP 1
Score: 52.373 bits (124), Expect = 2.18227e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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AT1G18660.3 | 2.18e-07 | 34.18% | zinc finger (C3HC4-type RING finger) fa... |
|
HSP 1
Score: 52.373 bits (124), Expect = 2.18227e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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AT1G18660.2 | 2.18e-07 | 34.18% | zinc finger (C3HC4-type RING finger) fa... |
|
HSP 1
Score: 52.373 bits (124), Expect = 2.18227e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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AT1G18660.4 | 2.18e-07 | 34.18% | zinc finger (C3HC4-type RING finger) fa... |
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HSP 1
Score: 52.373 bits (124), Expect = 2.18227e-07 Query: 6 SESFICCVCLDLLYKPIVLACGHVSCFWCVHRAMSNLHESHCPICRQPYGHFPTICQM---LHFLLLKMYPVAYKTRET 233 |
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| Related info for CF810848 |
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