vm04084, vm04084 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm04084
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)11
Primer 1	vm04084.forward primer: GGATTCTCACTCTGATACCATT
Primer 2	vm04084.reverse primer: GAACGATACACAACGAAGGT
Product Length	153
Max Length	196
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr03	supercontig	Vmac_chr03:35961956..35962082 .
chr3	supercontig	chr3:35043783..35043909 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG3	N/A	99.02	vm04084	View
2	Cranberry-Crimson_Queen-2007	LG3	N/A	89.4	vm04084	View
3	Cranberry-Mullica_Queen-2007	LG3	N/A	108.4	vm04084	View
4	Cranberry-CNJ02-1-2017	LG03	N/A	93.6	vm04084	View
5	Cranberry-Crimson_Queen-2017	LG03	N/A	84.6	vm04084	View
6	Cranberry-Mullica_Queen-2017	LG03	N/A	102.4	vm04084	View
7	Cranberry-[BG//BL/BN]95-F1	LG03	N/A	8.54	vm04084	View
8	Cranberry-Composite_map-F1	LG03	N/A	6.52	vm04084	View
9	Cranberry-Crimson_Queen-F1	LG03	N/A	1.79	vm04084	View
10	Cranberry-GH1/35-F1	LG03	N/A	4.55	vm04084	View
11	Cranberry-Mullica_Queen_1-F1	LG03	N/A	7.15	vm04084	View