vm04249, vm04249 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm04249
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GAGCCA)4
Primer 1	vm04249.forward primer: TGTTAGTGTCACTGTGGTCTGT
Primer 2	vm04249.reverse primer: TAAAATGGTGTAGTCTTCTCCC
Product Length	246
Max Length	258
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr06	supercontig	Vcev1_p0.Chr06:41030853..41031081 .
scaffold00263	supercontig	scaffold00263:232267..232498 .
chr6_H1	supercontig	chr6_H1:33663869..33664094 .
Vmac_chr09	supercontig	Vmac_chr09:30140622..30140853 .
chr9	supercontig	chr9:11344859..11345090 .
Chr06	supercontig	Chr06:10817338..10817569 .
Chr06_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr06_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:11958807..11959050 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.