vm05418, vm05418 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm05418
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AAG)6
Primer 1	vm05418.forward primer: GGGATAAACACTTACAGGAAGA
Primer 2	vm05418.reverse primer: CTAGCTAGCCGTCAGTTATTTC
Product Length	263
Max Length	266
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4_H1	supercontig	chr4_H1:3197422..3197644 .
Vmac_chr11	supercontig	Vmac_chr11:3208364..3208603 .
chr1	supercontig	chr1:4245735..4245969 .
Chr04_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr04_Vaccinium_vitis-idaea_ssp_minus:3268793..3269015 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG11	N/A	5.55	vm05418	View
2	Cranberry-Mullica_Queen-2007	LG11	N/A	6	vm05418	View
3	Cranberry-CNJ02-1-2017	LG11	N/A	9.6	vm05418	View
4	Cranberry-Mullica_Queen-2017	LG11	N/A	10.5	vm05418	View
5	Cranberry-Composite_map-F1	LG11	N/A	6.87	vm05418	View
6	Cranberry-Mullica_Queen_1-F1	LG11	N/A	7.16	vm05418	View
7	Cranberry-BB/CQ-F1	LG11	N/A	95.99	vm05418	View