vm09532, vm09532 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm09532
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GT)9
Primer 1	vm09532.forward primer: ACTAGTGCTCTGCGTTTCTATT
Primer 2	vm09532.reverse primer: GATGGAGGTGTGATTCTTAACT
Product Length	224
Max Length	237
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr03	supercontig	Vcev1_p0.Chr03:34617145..34617353 .
chr3_H1	supercontig	chr3_H1:30406287..30406492 .
Vmac_chr04	supercontig	Vmac_chr04:23119098..23119296 .
chr4	supercontig	chr4:12990214..12990412 .
Chr03	supercontig	Chr03:13965903..13966115 .
Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:38564918..38565121 .
Chr03_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr03_Vaccinium_vitis-idaea_ssp_minus:15468470..15468661 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.