vm12486, vm12486 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm12486
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TTAT)6
Primer 1	vm12486.forward primer: GGTGGAGATGCTCGTAGTATT
Primer 2	vm12486.reverse primer: CTAAGGGACGTCAAACCTAAC
Product Length	173
Max Length	177
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr10	supercontig	Vmac_chr10:883091..883242 .
chr10	supercontig	chr10:874049..874200 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG10	N/A	2.91	vm12486	View
2	Cranberry-Crimson_Queen-2007	LG10	N/A	0.9	vm12486	View
3	Cranberry-CNJ02-1-2017	LG10	N/A	0.9	vm12486	View
4	Cranberry-Crimson_Queen-2017	LG10	N/A	0	vm12486	View
5	Cranberry-Composite_map-F1	LG10	N/A	79.07	vm12486	View
6	Cranberry-Crimson_Queen-F1	LG10	N/A	76.31	vm12486	View
7	Cranberry-BB/CQ-F1	LG12	N/A	78.22	vm12486	View