vm39030, vm39030 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm39030
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)15
Primer 1	vm39030.forward primer: CTGATTACTGAGTCTACTAACACCA
Primer 2	vm39030.reverse primer: ACAGATTTGTAGTCACGAAGTG
Product Length	196
Max Length	218
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr05	supercontig	Vmac_chr05:24477963..24478144 .
chr5	supercontig	chr5:10537611..10537784 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG5	N/A	38.73	vm39030	View
2	Cranberry-Crimson_Queen-2007	LG5	N/A	29.9	vm39030	View
3	Cranberry-Mullica_Queen-2007	LG5	N/A	50.5	vm39030	View
4	Cranberry-CNJ02-1-2017	LG05	N/A	35.2	vm39030	View
5	Cranberry-Crimson_Queen-2017	LG05	N/A	27.8	vm39030	View
6	Cranberry-Mullica_Queen-2017	LG05	N/A	44.9	vm39030	View
7	Cranberry-Composite_map-F1	LG05	N/A	37.05	vm39030	View
8	Cranberry-Crimson_Queen-F1	LG05	N/A	30.17	vm39030	View
9	Cranberry-GH1/35-F1	LG05	N/A	39.37	vm39030	View
10	Cranberry-Mullica_Queen_1-F1	LG05	N/A	43.57	vm39030	View
11	Cranberry-BB/CQ-F1	LG10	N/A	42.81	vm39030	View