vm51409, vm51409 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm51409
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)9
Primer 1	vm51409.forward primer: TCCTAGGTTAATTCTTCCCATC
Primer 2	vm51409.reverse primer: GAGGAGAATCACAAGCTACATT
Product Length	213
Max Length	214
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr03	supercontig	Vmac_chr03:36297196..36297381 .
chr3	supercontig	chr3:37894858..37895043 .
Chr08_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr08_Vaccinium_vitis-idaea_ssp_minus:38035962..38036175 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG3	N/A	99.34	vm51409	View
2	Cranberry-Crimson_Queen-2007	LG3	N/A	89.4	vm51409	View
3	Cranberry-CNJ02-1-2017	LG03	N/A	93.1	vm51409	View
4	Cranberry-Crimson_Queen-2017	LG03	N/A	84.6	vm51409	View
5	Cranberry-Composite_map-F1	LG03	N/A	6.52	vm51409	View
6	Cranberry-Crimson_Queen-F1	LG03	N/A	1.79	vm51409	View