vm52682, vm52682 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm52682
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)12
Primer 1	vm52682.forward primer: CTCAGGTTATCAGGCTTATTTC
Primer 2	vm52682.reverse primer: CAATTAGTGTGTTCCCAACTC
Product Length	271
Max Length	308
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr03	supercontig	Vcev1_p0.Chr03:22478863..22479104 .
Vmac_chr04	supercontig	Vmac_chr04:11748864..11749120 .
chr4	supercontig	chr4:24121331..24121573 .
Chr03	supercontig	Chr03:24143487..24143735 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG4	N/A	36.88	vm52682	View
2	Cranberry-Crimson_Queen-2007	LG4	N/A	31.9	vm52682	View
3	Cranberry-Mullica_Queen-2007	LG4	N/A	41.8	vm52682	View
4	Cranberry-CNJ02-1-2017	LG04	N/A	38.9	vm52682	View
5	Cranberry-Crimson_Queen-2017	LG04	N/A	5.5	vm52682	View
6	Cranberry-Mullica_Queen-2017	LG04	N/A	41.2	vm52682	View
7	Cranberry-Composite_map-F1	LG04	N/A	23.94	vm52682	View
8	Cranberry-Crimson_Queen-F1	LG04	N/A	29.76	vm52682	View
9	Cranberry-GH1/35-F1	LG04	N/A	19.87	vm52682	View
10	Cranberry-Mullica_Queen_1-F1	LG04	N/A	44.16	vm52682	View