vm53000, vm53000 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm53000
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CT)11
Primer 1	vm53000.forward primer: CTCTCTCTAGCCAAGCAGATAC
Primer 2	vm53000.reverse primer: AAGATGTGAGGAAGCTAGGAG
Product Length	267
Max Length	289
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr06	supercontig	Vmac_chr06:22587841..22588087 .
chr6	supercontig	chr6:16157991..16158237 .

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	53.91	vm53000	View
2	Cranberry-Crimson_Queen-2007	LG6	N/A	47.2	vm53000	View
3	Cranberry-CNJ02-1-2017	LG06	N/A	49.2	vm53000	View
4	Cranberry-Crimson_Queen-2017	LG06	N/A	43.2	vm53000	View
5	Cranberry-Composite_map-F1	LG06	N/A	45.8	vm53000	View
6	Cranberry-Crimson_Queen-F1	LG06	N/A	38.14	vm53000	View