Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG3	82171_K70	82171_K70	marker_locus	64.03 cM
Cranberry-CNJ02-1-2007.LG3	SCF9815	SCF9815	marker_locus	69.83 cM
Cranberry-CNJ02-1-2007.LG3	SCF110888	SCF110888	marker_locus	70.05 cM
Cranberry-CNJ02-1-2007.LG3	SCF38340	SCF38340	marker_locus	72.59 cM
Cranberry-CNJ02-1-2007.LG3	121633_K63	121633_K63	marker_locus	76.73 cM
Cranberry-CNJ02-1-2007.LG3	SCF57479	SCF57479	marker_locus	81.65 cM
Cranberry-CNJ02-1-2007.LG3	1trimcontig440008	1trimcontig440008	marker_locus	83.16 cM
Cranberry-CNJ02-1-2007.LG3	411475_K63	411475_K63	marker_locus	83.28 cM
Cranberry-CNJ02-1-2007.LG3	42710_K70	42710_K70	marker_locus	84.99 cM
Cranberry-CNJ02-1-2007.LG3	SCF98686	SCF98686	marker_locus	85.12 cM
Cranberry-CNJ02-1-2007.LG3	SCF23339	SCF23339	marker_locus	95.53 cM
Cranberry-CNJ02-1-2007.LG3	SCF27755	SCF27755	marker_locus	97.68 cM
Cranberry-CNJ02-1-2007.LG3	vm04084	vm04084	marker_locus	99.02 cM
Cranberry-CNJ02-1-2007.LG3	vm51409	vm51409	marker_locus	99.34 cM
Cranberry-CNJ02-1-2007.LG3	scf20g	scf20g	marker_locus	99.46 cM
Cranberry-CNJ02-1-2007.LG3	SCF90229	SCF90229	marker_locus	100.45 cM
Cranberry-CNJ02-1-2007.LG3	scf511	scf511	marker_locus	100.59 cM
Cranberry-CNJ02-1-2007.LG3	vm78806	vm78806	marker_locus	100.83 cM
Cranberry-CNJ02-1-2007.LG3	Contig130Fb	Contig130Fb	marker_locus	103.52 cM
Cranberry-CNJ02-1-2007.LG4	418294_K63	418294_K63	marker_locus	0 cM
Cranberry-CNJ02-1-2007.LG4	SCF56561	SCF56561	marker_locus	1.75 cM
Cranberry-CNJ02-1-2007.LG4	SCF26697	SCF26697	marker_locus	1.99 cM
Cranberry-CNJ02-1-2007.LG4	1trimcontig176303	1trimcontig176303	marker_locus	2.11 cM
Cranberry-CNJ02-1-2007.LG4	ct119523	ct119523	marker_locus	3.08 cM
Cranberry-CNJ02-1-2007.LG4	2ms4d10b	2ms4d10b	marker_locus	3.6 cM

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Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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