Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG4	ct94504	ct94504	marker_locus	4.52 cM
Cranberry-CNJ02-1-2007.LG4	SCF83036	SCF83036	marker_locus	8.5 cM
Cranberry-CNJ02-1-2007.LG4	5ms2b12	5ms2b12	marker_locus	12.25 cM
Cranberry-CNJ02-1-2007.LG4	vm83024	vm83024	marker_locus	12.57 cM
Cranberry-CNJ02-1-2007.LG4	SCF162175	SCF162175	marker_locus	12.58 cM
Cranberry-CNJ02-1-2007.LG4	SCF9157	SCF9157	marker_locus	18.17 cM
Cranberry-CNJ02-1-2007.LG4	scf1172	scf1172	marker_locus	23.73 cM
Cranberry-CNJ02-1-2007.LG4	416328_K63	416328_K63	marker_locus	29.45 cM
Cranberry-CNJ02-1-2007.LG4	ct119590	ct119590	marker_locus	30.21 cM
Cranberry-CNJ02-1-2007.LG4	SCF72229	SCF72229	marker_locus	30.61 cM
Cranberry-CNJ02-1-2007.LG4	SCF113389	SCF113389	marker_locus	31.54 cM
Cranberry-CNJ02-1-2007.LG4	CA855F	CA855F	marker_locus	33.54 cM
Cranberry-CNJ02-1-2007.LG4	SCF140628	SCF140628	marker_locus	33.9 cM
Cranberry-CNJ02-1-2007.LG4	SCF46739	SCF46739	marker_locus	35.48 cM
Cranberry-CNJ02-1-2007.LG4	vm52682	vm52682	marker_locus	36.88 cM
Cranberry-CNJ02-1-2007.LG4	SCF6530	SCF6530	marker_locus	40.58 cM
Cranberry-CNJ02-1-2007.LG4	SCF124075	SCF124075	marker_locus	43.38 cM
Cranberry-CNJ02-1-2007.LG4	scf6955c	scf6955c	marker_locus	44.07 cM
Cranberry-CNJ02-1-2007.LG4	vm52204	vm52204	marker_locus	44.21 cM
Cranberry-CNJ02-1-2007.LG4	SCF28100	SCF28100	marker_locus	46.61 cM
Cranberry-CNJ02-1-2007.LG4	305731_K63	305731_K63	marker_locus	47.91 cM
Cranberry-CNJ02-1-2007.LG4	SCF154541	SCF154541	marker_locus	49.52 cM
Cranberry-CNJ02-1-2007.LG4	SCF38553	SCF38553	marker_locus	53.06 cM
Cranberry-CNJ02-1-2007.LG4	SCF15845	SCF15845	marker_locus	55.57 cM
Cranberry-CNJ02-1-2007.LG4	SCF194552	SCF194552	marker_locus	59.41 cM

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Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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