Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG11	SCF122746	SCF122746	marker_locus	12.75 cM
Cranberry-CNJ02-1-2007.LG11	307018_K70	307018_K70	marker_locus	16.51 cM
Cranberry-CNJ02-1-2007.LG11	SCF81909	SCF81909	marker_locus	17.73 cM
Cranberry-CNJ02-1-2007.LG11	SCF204332	SCF204332	marker_locus	24.18 cM
Cranberry-CNJ02-1-2007.LG11	SCF81294	SCF81294	marker_locus	24.59 cM
Cranberry-CNJ02-1-2007.LG11	scf3072b	scf3072b	marker_locus	27.8 cM
Cranberry-CNJ02-1-2007.LG11	SCF64185	SCF64185	marker_locus	35.77 cM
Cranberry-CNJ02-1-2007.LG11	SCF106182	SCF106182	marker_locus	36.77 cM
Cranberry-CNJ02-1-2007.LG11	SCF199831	SCF199831	marker_locus	36.83 cM
Cranberry-CNJ02-1-2007.LG11	SCF183590	SCF183590	marker_locus	37.75 cM
Cranberry-CNJ02-1-2007.LG11	SCF21596	SCF21596	marker_locus	41.89 cM
Cranberry-CNJ02-1-2007.LG11	vm68798	vm68798	marker_locus	47.89 cM
Cranberry-CNJ02-1-2007.LG11	SCF57497	SCF57497	marker_locus	49.7 cM
Cranberry-CNJ02-1-2007.LG11	SCF132506	SCF132506	marker_locus	49.71 cM
Cranberry-CNJ02-1-2007.LG11	SCF120937	SCF120937	marker_locus	52.27 cM
Cranberry-CNJ02-1-2007.LG11	SCF123189	SCF123189	marker_locus	52.71 cM
Cranberry-CNJ02-1-2007.LG11	482_K70	482_K70	marker_locus	53.15 cM
Cranberry-CNJ02-1-2007.LG11	SCF95754	SCF95754	marker_locus	53.2 cM
Cranberry-CNJ02-1-2007.LG11	SCF136826	SCF136826	marker_locus	53.65 cM
Cranberry-CNJ02-1-2007.LG11	308539_K70	308539_K70	marker_locus	54.52 cM
Cranberry-CNJ02-1-2007.LG11	1trimcontig444344	1trimcontig444344	marker_locus	54.53 cM
Cranberry-CNJ02-1-2007.LG11	SCF158255	SCF158255	marker_locus	55.15 cM
Cranberry-CNJ02-1-2007.LG11	SCF161998	SCF161998	marker_locus	57.08 cM
Cranberry-CNJ02-1-2007.LG11	SCF1047	SCF1047	marker_locus	70.21 cM
Cranberry-CNJ02-1-2007.LG11	SCF160647	SCF160647	marker_locus	71.76 cM

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Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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