Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG12	SCF11065	SCF11065	marker_locus	32.48 cM
Cranberry-CNJ02-1-2007.LG12	SCF69698	SCF69698	marker_locus	36.4 cM
Cranberry-CNJ02-1-2007.LG12	SCF16166	SCF16166	marker_locus	37.54 cM
Cranberry-CNJ02-1-2007.LG12	ct129169	ct129169	marker_locus	37.78 cM
Cranberry-CNJ02-1-2007.LG12	vm26877	vm26877	marker_locus	38.44 cM
Cranberry-CNJ02-1-2007.LG12	SCF34584	SCF34584	marker_locus	39.89 cM
Cranberry-CNJ02-1-2007.LG12	309084_K70	309084_K70	marker_locus	40.33 cM
Cranberry-CNJ02-1-2007.LG12	scf37h	scf37h	marker_locus	40.58 cM
Cranberry-CNJ02-1-2007.LG12	SCF37628	SCF37628	marker_locus	43.49 cM
Cranberry-CNJ02-1-2007.LG12	SCF6926	SCF6926	marker_locus	43.76 cM
Cranberry-CNJ02-1-2007.LG12	SCF76310	SCF76310	marker_locus	44.65 cM
Cranberry-CNJ02-1-2007.LG12	SCF13753	SCF13753	marker_locus	45.22 cM
Cranberry-CNJ02-1-2007.LG12	SCF46588	SCF46588	marker_locus	47.4 cM
Cranberry-CNJ02-1-2007.LG12	SCF98180	SCF98180	marker_locus	47.44 cM
Cranberry-CNJ02-1-2007.LG12	SCF34071	SCF34071	marker_locus	52.31 cM
Cranberry-CNJ02-1-2007.LG12	SCF59739	SCF59739	marker_locus	53.07 cM
Cranberry-CNJ02-1-2007.LG12	scf4b	scf4b	marker_locus	66.58 cM
Cranberry-CNJ02-1-2007.LG12	scf2882	scf2882	marker_locus	71.61 cM
Cranberry-CNJ02-1-2007.LG12	SCF116485	SCF116485	marker_locus	73.23 cM
Cranberry-CNJ02-1-2007.LG12	ct110752	ct110752	marker_locus	73.24 cM
Cranberry-CNJ02-1-2007.LG12	scf6355	scf6355	marker_locus	73.72 cM
Cranberry-CNJ02-1-2007.LG12	ct174735	ct174735	marker_locus	75.52 cM
Cranberry-CNJ02-1-2007.LG12	417587_K63	417587_K63	marker_locus	77.25 cM
Cranberry-CNJ02-1-2007.LG12	SCF28279	SCF28279	marker_locus	77.25 cM
Cranberry-CNJ02-1-2007.LG12	Ig28559a	Ig28559a	marker_locus	77.25 cM

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Last

Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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