Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG2	SCF66692	SCF66692	marker_locus	48.92 cM
Cranberry-CNJ02-1-2007.LG2	172672_K70	172672_K70	marker_locus	49.07 cM
Cranberry-CNJ02-1-2007.LG2	SCF56816	SCF56816	marker_locus	49.48 cM
Cranberry-CNJ02-1-2007.LG2	SCF18709	SCF18709	marker_locus	50.35 cM
Cranberry-CNJ02-1-2007.LG2	SCF158633	SCF158633	marker_locus	50.95 cM
Cranberry-CNJ02-1-2007.LG2	scf2000b	scf2000b	marker_locus	53.41 cM
Cranberry-CNJ02-1-2007.LG2	ct89348	ct89348	marker_locus	56.38 cM
Cranberry-CNJ02-1-2007.LG2	ct124256	ct124256	marker_locus	58.83 cM
Cranberry-CNJ02-1-2007.LG2	ct155461	ct155461	marker_locus	59.21 cM
Cranberry-CNJ02-1-2007.LG2	SCF48645	SCF48645	marker_locus	61.57 cM
Cranberry-CNJ02-1-2007.LG2	SCF158988	SCF158988	marker_locus	61.82 cM
Cranberry-CNJ02-1-2007.LG2	CA325	CA325	marker_locus	62.78 cM
Cranberry-CNJ02-1-2007.LG2	SCF73288	SCF73288	marker_locus	65.01 cM
Cranberry-CNJ02-1-2007.LG2	372875_K63	372875_K63	marker_locus	66.03 cM
Cranberry-CNJ02-1-2007.LG2	ct130570	ct130570	marker_locus	70.75 cM
Cranberry-CNJ02-1-2007.LG2	29080_K63	29080_K63	marker_locus	71.39 cM
Cranberry-CNJ02-1-2007.LG2	SCF13771	SCF13771	marker_locus	76.64 cM
Cranberry-CNJ02-1-2007.LG2	1trimcontig351427	1trimcontig351427	marker_locus	81.56 cM
Cranberry-CNJ02-1-2007.LG2	SCF26049	SCF26049	marker_locus	83.78 cM
Cranberry-CNJ02-1-2007.LG2	SCF965	SCF965	marker_locus	90.25 cM
Cranberry-CNJ02-1-2007.LG2	SCF74458	SCF74458	marker_locus	91.15 cM
Cranberry-CNJ02-1-2007.LG2	scf28l	scf28l	marker_locus	91.18 cM
Cranberry-CNJ02-1-2007.LG2	417854_K63	417854_K63	marker_locus	96.98 cM
Cranberry-CNJ02-1-2007.LG2	SCF77145	SCF77145	marker_locus	105.65 cM
Cranberry-CNJ02-1-2007.LG2	SCF31394	SCF31394	marker_locus	106.33 cM

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Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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