COP1-1, COP1-1 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	COP1-1
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Primer 1	COP1-1.Forward Primer: CTCCAACTCTGAACTGATTCCC
Primer 2	COP1-1.Reverse Primer: GAAACGCGTCCTTGATTATCTC
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr01	supercontig	Vcev1_p0.Chr01:47113751..47114027 .
scaffold00752	supercontig	scaffold00752:14767..15043 .
Vmac_chr06	supercontig	Vmac_chr06:32418971..32419276 .
chr6	supercontig	chr6:7236575..7236883 .
Chr01	supercontig	Chr01:8284429..8284703 .
Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr01_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:8127819..8128094 .
Chr01_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr01_Vaccinium_vitis-idaea_ssp_minus:8127649..8127923 .

Publications


Year	Publication
2016	McCallum S, Graham J, Jorgensen L, Rowland L, Bassil N, Hancock J, Wheeler E, Vining K, Poland J, Olmstead J, Buck E, Wiedow C, Jaclson E, Allan B, Hackett C. Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing. Molecular Breeding. 2016; 36(41):1-24.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-Jewel	LG8a	N/A	83	COP1-1	View