Fruit shape: persistent homology, qFSPH.GRYG.LG02.14 (QTL) Vaccinium macrocarpon

QTL Overview
QTL LabelqFSPH.GRYG.LG02.14
Published Symbolpc1-14-chr2-cM19.17
Trait NameFruit shape: persistent homology
Trait AliasN/A
Trait StudyCranberry-Fruit_shape-Zalapa-2018
PopulationN/A
Female ParentN/A
Male ParentN/A
Colocalizing Markerscaffold_209315_135
SCF125667
scaffold_4235_7663
Neighboring MarkerN/A
EnvironmentN/A
LOD11.34
Additivity Dominance RatioN/A
R20.07
CommentsN/A
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2supercontigchr2:23327196..23327353 .
Vmac_chr02supercontigVmac_chr02:23553537..23553694 .
Map Positions
#Map NameLinkage GroupBinChromosomePeakSpan StartSpan StopMapViewer
1Cranberry-Composite_map-F1LG02N/AN/A19--View
Sequences
The following sequences are available for this feature:

QTL from alignment at chr2:23327196..23327353

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qFSPH.GRYG.LG02.14 ID=qFSPH.GRYG.LG02.14; Name=Fruit shape: persistent homology; organism=Vaccinium macrocarpon; type=QTL; length=158bp; location=Sequence derived from: chr2:23327196..23327353 (Vaccinium macrocarpon
AAGGGAGACATTACACAACAATATTTTTTTAAAAAACTAAAGTAATAGAT
GCAAGATAACCAGTACTATCTCACACACACACACACACACACACACATAT
TTATAACTACAATAGTATCCTATAAAGTTTACAAAACACATACTTGGTCA
ATCTCGAA
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QTL from alignment at Vmac_chr02:23553537..23553694

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qFSPH.GRYG.LG02.14 ID=qFSPH.GRYG.LG02.14; Name=Fruit shape: persistent homology; organism=Vaccinium macrocarpon; type=QTL; length=158bp; location=Sequence derived from: Vmac_chr02:23553537..23553694 (Vaccinium macrocarpon
AAGGGAGACATTACACAACAATATTTTTTTAAAAAACTAAAGTAATAGAT
GCAAGATAACCAGTACTATCTCACACACACACACACACACACACACATAT
TTATAACTACAATAGTATCCTATAAAGTTTACAAAACACATACTTGGTCA
ATCTCGAA
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