scaffold_42843, scaffold_42843 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	scaffold_42843
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Primer 1	scaffold_42843.Forward primer: TTTCTCCATCTCTCTCTTATCC
Primer 2	scaffold_42843.Reverse Primer: ACTCACTGTTCACCTTCTCTG
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr12	supercontig	Vmac_chr12:5704569..5704754 .
chr12	supercontig	chr12:5538584..5538765 .
Chr05	supercontig	Chr05:5468161..5468333 .
Chr05_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr05_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:6437462..6437650 .
Chr05_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr05_Vaccinium_vitis-idaea_ssp_minus:6656235..6656420 .

Publications


Year	Publication
2017	Schlautman B, Covarrubias-Pazaran G, Diaz-Garcia L, Iorizzo M, Polashock J, Grygleski E, Vorsa N, Zalapa J. Construction of a High-Density American Cranberry (Vaccinium macrocarpon Ait.) Composite Map Using Genotyping-by-Sequencing for Multi-pedigree Linkage mapping. G3 (Bethesda, Md.). 2017 Mar 01.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-Composite_map-F1	LG12	N/A	17.15	scaffold_42843	View
2	Cranberry-Crimson_Queen-F1	LG12	N/A	9.54	scaffold_42843	View
3	Cranberry-Mullica_Queen_1-F1	LG12	N/A	17.89	scaffold_42843	View