Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness

Publication Overview
TitleConstruction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness
AuthorsRowland LJ, Ogden EL, Bassil N, Buck EJ, McCallum S, Graham J, Brown A, Wiedow C, Campbell AM, Haynes KG, Vinyard BT
TypeJournal Article
Journal NameMolecular breeding
Volume34
Issue4
Year2014
Page(s)2033-2048
CitationRowland LJ, Ogden EL, Bassil N, Buck EJ, McCallum S, Graham J, Brown A, Wiedow C, Campbell AM, Haynes KG, Vinyard BT. Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness. Molecular breeding. 2014; 34(4):2033-2048.

Abstract

A genetic linkage map has been constructed from an interspecific diploid blueberry population [(Vaccinium darrowii Fla4B × Vaccinium corymbosum W85-20) F₁#10 × V. corymbosum W85-23] designed to segregate for cold hardiness and chilling requirement. The map is comprised of 12 linkage groups (equivalent to the haploid chromosome number of diploid blueberry) and totals 1,740 cM. Included on the map are 265 markers based on simple sequence repeats, expressed sequence tag-polymerase chain reactions, single nucleotide polymorphisms, and randomly amplified polymorphic DNAs. The estimated map coverage is 89.9 %, and the average distance between markers is 7.2 cM. The mapping population was evaluated for 2 years (2009 and 2010) for mid-winter bud cold hardiness and for 3 years (2011–2013) for chilling requirement under controlled conditions. Broad-sense heritability of both cold hardiness and chilling requirement was quite high under these conditions with values of 0.88 and 0.86, respectively. One quantitative trait locus/loci (QTL) for cold hardiness and one for chilling requirement were identified that were consistent over at least 2 years. A second weaker QTL for chilling requirement was detected in only one of the 3 years.
Features
This publication contains information about 215 features:
Feature NameUniquenameType
SL413SL413genetic_marker
SL42SL42genetic_marker
UBC211UBC211genetic_marker
UBC854UBC854genetic_marker
ANPER00666-2ANPER00666-2genetic_marker
AOMT01781-1AOMT01781-1genetic_marker
CA221CA221genetic_marker
pink-00018pink-00018genetic_marker
ripe-00162ripe-00162genetic_marker
cold toleranceqCTOL.F1#10xW85-23.LG4QTL
cold toleranceqCTOL.F1#10xW85-23.LG4.2QTL
chilling requirementqCHR.F1#10xW85-23.LG6QTL
chilling requirementqCHR.F1#10xW85-23.LG6.2QTL
chilling requirementqCHR.F1#10xW85-23.LG8QTL
UBC34UBC34genetic_marker

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
Blueberry-cold_tolerance-chilling_requirement-Rowland-2014
Featuremaps
This publication contains information about 1 maps:
Map Name
Blueberry-F1#10xW85-23-F1
Stocks
This publication contains information about 4 stocks:
Stock NameUniquenameType
F1#10F1#10accession
F1#10_x_W85-23-F1F1#10_x_W85-23-F1population
W8520W85-20accession
W8523W85-23accession
Properties
Additional details for this publication include:
Property NameValue
Publication TypeJournal Article
Publication Date2014
Published Location|||
Language Abbreng
Publication Model[electronic resource].
URLhttp://dx.doi.org/10.1007/s11032-014-0161-9
KeywordsVaccinium corymbosum, Vaccinium darrowii, blueberries, chilling requirement, chromosome mapping, chromosome number, cold tolerance, diploidy, haploidy, heritability, interspecific hybridization, linkage groups, loci, microsatellite repeats, quantitative trait loci, single nucleotide polymorphism, winter