KAN12415, KAN12415 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN12415
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(CT)6
Primer 1	KAN12415.forward primer: GCATGACAGCACGAAAACAT
Primer 2	KAN12415.reverse primer: GAAGAAGTCCCACGCGATAG
Max Length	235
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr09	supercontig	Vcev1_p0.Chr09:49832546..49832756 .
scaffold00004	supercontig	scaffold00004:637342..637552 .
chr9_H1	supercontig	chr9_H1:40679582..40679792 .
Vmac_chr05	supercontig	Vmac_chr05:33235567..33235776 .
chr5	supercontig	chr5:1512929..1513138 .
Chr09	supercontig	Chr09:3148403..3148622 .
Chr09_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr09_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:4140661..4140875 .
Chr09_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr09_Vaccinium_vitis-idaea_ssp_minus:3886086..3886306 .

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.