VCBBH1APTTM, VCBBH1APTTM (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	VCBBH1APTTM
Genbank ID	N/A
Type	EST-SSR
Species	Vaccinium corymbosum
Repeat Motif	(tat)4
Primer 1	VCBBH1APTTM.forward primer: TACCGGTAATTGATCTCGAAGG
Primer 2	VCBBH1APTTM.reverse primer: ATCGAAAACCTCTATCCACACG
Max Length	267
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr12	supercontig	Vcev1_p0.Chr12:46046138..46046383 .
scaffold00022	supercontig	scaffold00022:230017..230262 .
chr12_H1	supercontig	chr12_H1:37250992..37251236 .
Vmac_chr07	supercontig	Vmac_chr07:33333973..33334239 .
chr7	supercontig	chr7:32333171..32333437 .
Chr12	supercontig	Chr12:31891674..31891949 .
Chr12_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr12_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:36998980..36999249 .
Chr12_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr12_Vaccinium_vitis-idaea_ssp_minus:37371773..37372044 .

Publications


Year	Publication
2012	Rowland LJ, Alkharouf N, Darwish O, Ogden EL, Polashock JJ, Bassil NV, Main D. Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation. BMC plant biology. 2012; 12:46.