1trimcontig238795, 1trimcontig238795 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	1trimcontig238795
Genbank ID	KP279233
Type	EST-SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AG)14
Primer 1	1trimcontig238795.forward primer: AGAGGGAGAGAAGAGTATGGTC
Primer 2	1trimcontig238795.reverse primer: CCGTCAAGATTTGTGAAGAT
Max Length	287
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP279233

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	supercontig	chr1:11801545..11801808 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG1	N/A	36.85	1trimcontig238795	View
2	Cranberry-CNJ02-1-2017	LG01	N/A	34.8	1trimcontig238795	View
3	Cranberry-Crimson_Queen-2017	LG01	N/A	31.4	1trimcontig238795	View
4	Cranberry-Crimson_Queen-2007	LG1	N/A	32.2	1tc238795	View
5	Cranberry-Composite_map-F1	LG01	N/A	77.27	1trimcontig238795	View
6	Cranberry-Crimson_Queen-F1	LG01	N/A	50.06	1trimcontig238795	View