416275_K63, 416275_K63 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	416275_K63
Genbank ID	KP279184
Type	EST-SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)15
Primer 1	416275_K63.forward primer: GGTTATGATGGTGGGAAAG
Primer 2	416275_K63.reverse primer: TGCACCTCCTCTCTCTCTAA
Max Length	197
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP279184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr08	supercontig	Vcev1_p0.Chr08:2810650..2810797 .
scaffold00134	supercontig	scaffold00134:286863..287001 .
Vmac_chr03	supercontig	Vmac_chr03:2660235..2660364 .
chr3	supercontig	chr3:2717464..2717594 .
Chr08	supercontig	Chr08:2406602..2406739 .
Chr08_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr08_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:2680613..2680787 .
Chr08_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr08_Vaccinium_vitis-idaea_ssp_minus:2445393..2445556 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.