ct115258, ct115258 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	ct115258
Genbank ID	KP279111
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CT)13
Primer 1	ct115258.forward primer: GTTCGTTGTGGAAGTCACAT
Primer 2	ct115258.reverse primer: CAAAATGAGTGCCAGATAGTG
Max Length	207
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP279111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr05	supercontig	Vmac_chr05:4755853..4756022 .
chr5	supercontig	chr5:27794021..27794196 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG5	N/A	89.61	ct115258	View
2	Cranberry-Crimson_Queen-2007	LG5	N/A	81.9	ct115258	View
3	Cranberry-Mullica_Queen-2007	LG5	N/A	98	ct115258	View
4	Cranberry-CNJ02-1-2017	LG05	N/A	72.7	ct115258	View
5	Cranberry-Crimson_Queen-2017	LG05	N/A	66.3	ct115258	View
6	Cranberry-Mullica_Queen-2017	LG05	N/A	79.5	ct115258	View
7	Cranberry-Composite_map-F1	LG05	N/A	79.37	ct115258	View
8	Cranberry-Crimson_Queen-F1	LG05	N/A	79.37	ct115258	View
9	Cranberry-GH1/35-F1	LG05	N/A	75.82	ct115258	View
10	Cranberry-Mullica_Queen_1-F1	LG05	N/A	92.47	ct115258	View
11	Cranberry-BB/CQ-F1	LG10	N/A	100.23	ct115258	View
12	Cranberry-BB/CQ-F1	LG10	N/A	1.84	ct115258	View