SCF108454, SCF108454 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF108454
Genbank ID	KP278819
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TG)9
Primer 1	SCF108454.forward primer: CTAACTAAATGAAGTGTTCCCCT
Primer 2	SCF108454.reverse primer: ATGTCACGCTCTGAAGTTTG
Max Length	198
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278819

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr06	supercontig	Vmac_chr06:1038860..1039029 .
chr6	supercontig	chr6:36974599..36974768 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	99.09	SCF108454	View
2	Cranberry-Crimson_Queen-2007	LG6	N/A	85.2	SCF108454	View
3	Cranberry-Mullica_Queen-2007	LG6	N/A	116.5	SCF108454	View
4	Cranberry-Crimson_Queen-F1	LG06	N/A	0	SCF108454	View
5	Cranberry-Mullica_Queen_1-F1	LG06	N/A	0	SCF108454	View
6	Blueberry-F1#10_x_W85-23-F1-2017	LG06	N/A	83.9	SCF108454	View
7	Blueberry-F1#10-2017	LG06	N/A	94.6	SCF108454	View
8	Cranberry-CNJ02-1-2017	LG06	N/A	90.6	SCF108454	View
9	Cranberry-Crimson_Queen-2017	LG06	N/A	78.7	SCF108454	View
10	Cranberry-Mullica_Queen-2017	LG06	N/A	102.4	SCF108454	View
11	Cranberry-Composite_map-F1	LG06	N/A	0.9	SCF108454	View