SCF11431, SCF11431 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF11431
Genbank ID	KP278637
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)13
Primer 1	SCF11431.forward primer: GCTGCTGATTTGTTATGTAGAG
Primer 2	SCF11431.reverse primer: CACTTAGCCCCTTAAACTATT
Max Length	318
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278637

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr05	supercontig	Vmac_chr05:8880980..8881265 .
chr5	supercontig	chr5:23683755..23684030 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG5	N/A	74.69	SCF11431	View
2	Cranberry-Crimson_Queen-2007	LG5	N/A	69.8	SCF11431	View
3	Cranberry-Mullica_Queen-2007	LG5	N/A	81	SCF11431	View
4	Cranberry-CNJ02-1-2017	LG05	N/A	67	SCF11431	View
5	Cranberry-Crimson_Queen-2017	LG05	N/A	65.4	SCF11431	View
6	Cranberry-Mullica_Queen-2017	LG05	N/A	69.3	SCF11431	View
7	Cranberry-Composite_map-F1	LG05	N/A	63.17	SCF11431	View
8	Cranberry-Crimson_Queen-F1	LG05	N/A	65.66	SCF11431	View
9	Cranberry-GH1/35-F1	LG05	N/A	61.48	SCF11431	View
10	Cranberry-Mullica_Queen_1-F1	LG05	N/A	73.38	SCF11431	View
11	Cranberry-Mullica_Queen_2-F1	LG05	N/A	63.06	SCF11431	View