SCF118608, SCF118608 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF118608
Genbank ID	KP278841
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)14
Primer 1	SCF118608.forward primer: AACTACTCGATCTTCACCCTTA
Primer 2	SCF118608.reverse primer: AGGAGACCAACACTTAACCTC
Max Length	256
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278841

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr11	supercontig	Vmac_chr11:38651252..38651478 .
chr11	supercontig	chr11:36423240..36423456 .
Chr04	supercontig	Chr04:35424606..35424808 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG11	N/A	82.26	SCF118608	View
2	Cranberry-Crimson_Queen-2007	LG11	N/A	74.1	SCF118608	View
3	Cranberry-Mullica_Queen-2007	LG11	N/A	97.5	SCF118608	View
4	Cranberry-CNJ02-1-2017	LG11	N/A	75.1	SCF118608	View
5	Cranberry-Crimson_Queen-2017	LG11	N/A	65.4	SCF118608	View
6	Cranberry-Mullica_Queen-2017	LG11	N/A	87.3	SCF118608	View
7	Cranberry-Composite_map-F1	LG11	N/A	84.31	SCF118608	View
8	Cranberry-Crimson_Queen-F1	LG11	N/A	78.21	SCF118608	View
9	Cranberry-Mullica_Queen_1-F1	LG11	N/A	96.77	SCF118608	View