SCF121995, SCF121995 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF121995
Genbank ID	KP278845
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AC)14
Primer 1	SCF121995.forward primer: TAGTCGTGACCAAGAGTGATTA
Primer 2	SCF121995.reverse primer: GCCACCGAGTATATTTCTATGT
Max Length	179
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278845

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr01	supercontig	Vmac_chr01:30131610..30131759 .
chr1	supercontig	chr1:19975294..19975443 .
Chr07_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr07_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:41132357..41132708 .
Chr07_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr07_Vaccinium_vitis-idaea_ssp_minus:36467330..36467678 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG1	N/A	57.45	SCF121995	View
2	Cranberry-Crimson_Queen-2007	LG1	N/A	49.7	SCF121995	View
3	Cranberry-Mullica_Queen-2007	LG1	N/A	65.1	SCF121995	View
4	Cranberry-CNJ02-1-2017	LG01	N/A	53.6	SCF121995	View
5	Cranberry-Crimson_Queen-2017	LG01	N/A	46.2	SCF121995	View
6	Cranberry-Mullica_Queen-2017	LG01	N/A	61.5	SCF121995	View
7	Cranberry-Composite_map-F1	LG01	N/A	55.02	SCF121995	View
8	Cranberry-Crimson_Queen-F1	LG01	N/A	32.78	SCF121995	View
9	Cranberry-Mullica_Queen_1-F1	LG01	N/A	37.54	SCF121995	View
10	Cranberry-Mullica_Queen_2-F1	LG01	N/A	66.15	SCF121995	View
11	Cranberry-Stevens-F1	LG01	N/A	44.88	SCF121995	View