SCF122746, SCF122746 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF122746
Genbank ID	KP278846
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)13
Primer 1	SCF122746.forward primer: ATTGTATGAAAACCCTAACCC
Primer 2	SCF122746.reverse primer: GAGACGATTCCAAATATAGCA
Max Length	218
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278846

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr11	supercontig	Vmac_chr11:6133583..6133750 .
chr11	supercontig	chr11:5467532..5467697 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG11	N/A	12.75	SCF122746	View
2	Cranberry-Crimson_Queen-2007	LG11	N/A	10.4	SCF122746	View
3	Cranberry-Mullica_Queen-2007	LG11	N/A	14.8	SCF122746	View
4	Cranberry-CNJ02-1-2017	LG11	N/A	14	SCF122746	View
5	Cranberry-Crimson_Queen-2017	LG11	N/A	9.2	SCF122746	View
6	Cranberry-Mullica_Queen-2017	LG11	N/A	16.1	SCF122746	View
7	Cranberry-Composite_map-F1	LG11	N/A	11.07	SCF122746	View
8	Cranberry-Crimson_Queen-F1	LG11	N/A	8.35	SCF122746	View
9	Cranberry-Mullica_Queen_1-F1	LG11	N/A	16.7	SCF122746	View