SCF154541, SCF154541 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF154541
Genbank ID	KP278900
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)12
Primer 1	SCF154541.forward primer: AGAAAGCACAGTAGGTATGGAG
Primer 2	SCF154541.reverse primer: CAAGAAACCCTAGAGACCAAT
Max Length	285
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278900

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr04	supercontig	Vmac_chr04:20576902..20577143 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG4	N/A	49.52	SCF154541	View
2	Cranberry-Crimson_Queen-2007	LG4	N/A	44.3	SCF154541	View
3	Cranberry-Mullica_Queen-2007	LG4	N/A	54.3	SCF154541	View
4	Cranberry-CNJ02-1-2017	LG04	N/A	49.1	SCF154541	View
5	Cranberry-Crimson_Queen-2017	LG04	N/A	16.5	SCF154541	View
6	Cranberry-Mullica_Queen-2017	LG04	N/A	50.5	SCF154541	View
7	Cranberry-Composite_map-F1	LG04	N/A	35.64	SCF154541	View
8	Cranberry-Crimson_Queen-F1	LG04	N/A	40.46	SCF154541	View
9	Cranberry-Mullica_Queen_1-F1	LG04	N/A	59.04	SCF154541	View
10	Cranberry-Mullica_Queen_2-F1	LG04	N/A	37.42	SCF154541	View
11	Cranberry-Stevens-F1	LG04	N/A	22.41	SCF154541	View