SCF158633, SCF158633 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF158633
Genbank ID	KP278906
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)18
Primer 1	SCF158633.forward primer: AGATGCTGAAGTTTTCCCTT
Primer 2	SCF158633.reverse primer: TATGTGGATTCTTTGCCTTG
Max Length	195
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278906

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr02	supercontig	Vmac_chr02:17080081..17080252 .
chr2	supercontig	chr2:15847606..15847769 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG2	N/A	50.95	SCF158633	View
2	Cranberry-Crimson_Queen-2007	LG2	N/A	47	SCF158633	View
3	Cranberry-Mullica_Queen-2007	LG2	N/A	56.6	SCF158633	View
4	Cranberry-CNJ02-1-2017	LG02	N/A	48.7	SCF158633	View
5	Cranberry-Crimson_Queen-2017	LG02	N/A	43.3	SCF158633	View
6	Cranberry-Mullica_Queen-2017	LG02	N/A	51.6	SCF158633	View
7	Cranberry-Composite_map-F1	LG02	N/A	52.97	SCF158633	View
8	Cranberry-Crimson_Queen-F1	LG02	N/A	55.46	SCF158633	View
9	Cranberry-Mullica_Queen_1-F1	LG02	N/A	63.5	SCF158633	View