SCF1648, SCF1648 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF1648
Genbank ID	KP278599
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TG)10
Primer 1	SCF1648.forward primer: GTTGATCTGAAGGAAACCAA
Primer 2	SCF1648.reverse primer: TCGTATTAACTCCCCTATTGAC
Max Length	288
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278599

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr09	supercontig	Vmac_chr09:32932954..32933210 .
chr9	supercontig	chr9:8581807..8582064 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG9	N/A	85.14	SCF1648	View
2	Cranberry-CNJ02-1-2007	LG9	N/A	66.42	SCF1648	View
3	Cranberry-Crimson_Queen-2007	LG9	N/A	60.7	SCF1648	View
4	Cranberry-CNJ02-1-2017	LG09	N/A	63	SCF1648	View
5	Cranberry-Crimson_Queen-2017	LG09	N/A	54.2	SCF1648	View
6	Cranberry-[BG//BL/BN]95-F1	LG09	N/A	23.3	SCF1648	View
7	Cranberry-Composite_map-F1	LG09	N/A	25.15	SCF1648	View
8	Cranberry-Crimson_Queen-F1	LG09	N/A	18.54	SCF1648	View