SCF160647, SCF160647 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF160647
Genbank ID	KP278909
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)10
Primer 1	SCF160647.forward primer: TAACTCAAAGAACCTAACCCC
Primer 2	SCF160647.reverse primer: TAAAGTGACAGGTAATGTCGTC
Max Length	178
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278909

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr11	supercontig	Vmac_chr11:35246239..35246385 .
chr11	supercontig	chr11:33248313..33248453 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG11	N/A	71.76	SCF160647	View
2	Cranberry-Crimson_Queen-2007	LG11	N/A	65.5	SCF160647	View
3	Cranberry-Mullica_Queen-2007	LG11	N/A	88.5	SCF160647	View
4	Cranberry-CNJ02-1-2017	LG11	N/A	68.6	SCF160647	View
5	Cranberry-Crimson_Queen-2017	LG11	N/A	54.3	SCF160647	View
6	Cranberry-Mullica_Queen-2017	LG11	N/A	87.3	SCF160647	View
7	Cranberry-Composite_map-F1	LG11	N/A	77.45	SCF160647	View
8	Cranberry-Crimson_Queen-F1	LG11	N/A	72.26	SCF160647	View
9	Cranberry-Mullica_Queen_1-F1	LG11	N/A	86.06	SCF160647	View