SCF162565, SCF162565 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF162565
Genbank ID	KP278913
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GTA)10
Primer 1	SCF162565.forward primer: CTTCCGTGATTGTTCTTGTAG
Primer 2	SCF162565.reverse primer: ACACAGATGGGATGTTGTATC
Max Length	180
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278913

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr03	supercontig	Vmac_chr03:1692946..1693092 .
chr3	supercontig	chr3:1765477..1765607 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG3	N/A	4.65	SCF162565	View
2	Cranberry-Crimson_Queen-2007	LG3	N/A	2.7	SCF162565	View
3	Cranberry-Mullica_Queen-2007	LG3	N/A	6.6	SCF162565	View
4	Cranberry-CNJ02-1-2017	LG03	N/A	4.8	SCF162565	View
5	Cranberry-Crimson_Queen-2017	LG03	N/A	0	SCF162565	View
6	Cranberry-Mullica_Queen-2017	LG03	N/A	10.2	SCF162565	View
7	Cranberry-Composite_map-F1	LG03	N/A	85.17	SCF162565	View
8	Cranberry-Crimson_Queen-F1	LG03	N/A	84.27	SCF162565	View
9	Cranberry-GH1/35-F1	LG03	N/A	83.51	SCF162565	View
10	Cranberry-Mullica_Queen_1-F1	LG03	N/A	107.02	SCF162565	View