SCF189827, SCF189827 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF189827
Genbank ID	KP278938
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AG)9
Primer 1	SCF189827.forward primer: TTCATTTCCTTACACTTCCC
Primer 2	SCF189827.reverse primer: GTTAGCTTCTTCTCCTTCTTCA
Max Length	187
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278938

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr10	supercontig	Vmac_chr10:12357070..12357229 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG10	N/A	39.95	SCF189827	View
2	Cranberry-Mullica_Queen-2007	LG10	N/A	49.3	SCF189827	View
3	Cranberry-CNJ02-1-2017	LG10	N/A	30.6	SCF189827	View
4	Cranberry-Mullica_Queen-2017	LG10	N/A	38.4	SCF189827	View
5	Cranberry-Composite_map-F1	LG10	N/A	45.75	SCF189827	View
6	Cranberry-Mullica_Queen_1-F1	LG10	N/A	47.13	SCF189827	View
7	Cranberry-Mullica_Queen_2-F1	LG10	N/A	43.4	SCF189827	View
8	Cranberry-Stevens-F1	LG10	N/A	41.87	SCF189827	View
9	Cranberry-BB/CQ-F1	LG12	N/A	43.95	SCF189827	View