SCF171621, SCF171621 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF171621
Genbank ID	KP278919
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CT)12
Primer 1	SCF171621.forward primer: CACCACTCCCCATTTTAAG
Primer 2	SCF171621.reverse primer: AAGGGACAGAGGAAGTATTTG
Max Length	209
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278919

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr06	supercontig	Vmac_chr06:31852885..31853065 .
chr6	supercontig	chr6:7794547..7794721 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	17.54	SCF171621	View
2	Cranberry-Crimson_Queen-2007	LG6	N/A	13.9	SCF171621	View
3	Cranberry-CNJ02-1-2017	LG06	N/A	13.9	SCF171621	View
4	Cranberry-Crimson_Queen-2017	LG06	N/A	11	SCF171621	View
5	Cranberry-Composite_map-F1	LG06	N/A	74.47	SCF171621	View
6	Cranberry-Crimson_Queen-F1	LG06	N/A	71.14	SCF171621	View
7	Cranberry-Stevens-F1	LG06	N/A	65.8	SCF171621	View