SCF172019, SCF172019 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF172019
Genbank ID	KP278920
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)14
Primer 1	SCF172019.forward primer: TGTGAGTAGTTGTTGAAGGGA
Primer 2	SCF172019.reverse primer: CCTCGAAAATCCGGTAAAT
Max Length	279
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278920

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr01	supercontig	Vmac_chr01:48196738..48196959 .
chr1	supercontig	chr1:1601917..1602150 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG1	N/A	2.19	SCF172019	View
2	Cranberry-Crimson_Queen-2007	LG1	N/A	0.6	SCF172019	View
3	Cranberry-Mullica_Queen-2007	LG1	N/A	2.1	SCF172019	View
4	Cranberry-CNJ02-1-2017	LG01	N/A	1.1	SCF172019	View
5	Cranberry-Crimson_Queen-2017	LG01	N/A	0	SCF172019	View
6	Cranberry-Mullica_Queen-2017	LG01	N/A	0	SCF172019	View
7	Cranberry-Composite_map-F1	LG01	N/A	113.92	SCF172019	View
8	Cranberry-Crimson_Queen-F1	LG01	N/A	79.29	SCF172019	View
9	Cranberry-Mullica_Queen_1-F1	LG01	N/A	106.98	SCF172019	View