SCF174468, SCF174468 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF174468
Genbank ID	KP278926
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AG)13
Primer 1	SCF174468.forward primer: CAACATTCTTCGCTCACAA
Primer 2	SCF174468.reverse primer: CTAAGAGTTGACATGATTGGC
Max Length	178
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278926

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr02	supercontig	Vmac_chr02:18892685..18892837 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG2	N/A	43.5	SCF174468	View
2	Cranberry-CNJ02-1-2007	LG2	N/A	48.87	SCF174468	View
3	Cranberry-Crimson_Queen-2007	LG2	N/A	45	SCF174468	View
4	Cranberry-Mullica_Queen-2007	LG2	N/A	54.6	SCF174468	View
5	Cranberry-CNJ02-1-2017	LG02	N/A	47.4	SCF174468	View
6	Cranberry-Crimson_Queen-2017	LG02	N/A	41.5	SCF174468	View
7	Cranberry-Mullica_Queen-2017	LG02	N/A	50.5	SCF174468	View
8	Cranberry-Composite_map-F1	LG02	N/A	54.75	SCF174468	View
9	Cranberry-Crimson_Queen-F1	LG02	N/A	57.25	SCF174468	View
10	Cranberry-Mullica_Queen_1-F1	LG02	N/A	65.28	SCF174468	View