SCF181772, SCF181772 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF181772
Genbank ID	KP278931
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TTA)28
Primer 1	SCF181772.forward primer: AGCAACGTATGGTGGTATC
Primer 2	SCF181772.reverse primer: CATTTGTTTCCACAGCTTC
Max Length	179
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278931

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr11	supercontig	Vmac_chr11:37393746..37393862 .
chr11	supercontig	chr11:35295203..35295326 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG11	N/A	78.61	SCF181772	View
2	Cranberry-Crimson_Queen-2007	LG11	N/A	70.7	SCF181772	View
3	Cranberry-Mullica_Queen-2007	LG11	N/A	93.5	SCF181772	View
4	Cranberry-CNJ02-1-2017	LG11	N/A	75.1	SCF181772	View
5	Cranberry-Crimson_Queen-2017	LG11	N/A	65.4	SCF181772	View
6	Cranberry-Mullica_Queen-2017	LG11	N/A	87.3	SCF181772	View
7	Cranberry-Mullica_Queen-2007	LG11	N/A	93.6	SCF181772b	View
8	Cranberry-Composite_map-F1	LG11	N/A	81.02	SCF181772	View
9	Cranberry-Crimson_Queen-F1	LG11	N/A	75.83	SCF181772	View
10	Cranberry-Mullica_Queen_1-F1	LG11	N/A	93.19	SCF181772	View
11	Cranberry-Mullica_Queen_2-F1	LG11	N/A	84.55	SCF181772	View
12	Cranberry-Stevens-F1	LG11	N/A	46.78	SCF181772	View