scf26r, scf26r (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	scf26r
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(ct)20
Primer 1	scf26r.forward primer: ATGATGTTGGATGTGCCTCA
Primer 2	scf26r.reverse primer: TTCCTCAACAAACCCTCCAC
Max Length	260
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr04	supercontig	Vmac_chr04:35610172..35610423 .
chr4	supercontig	chr4:196873..197120 .

Publications


Year	Publication
2011	Georgi L, Herai RH, Vidal R, Falsarella Carazzolle M, Guimarães Pereira G, Polashock J, Vorsa N. Cranberry microsatellite marker development from assembled next-generation genomic sequence. Molecular breeding. 2011.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG4	N/A	115.55	scf26r	View
2	Cranberry-CNJ02-1-2007	LG4	N/A	97.18	scf26r	View
3	Cranberry-Crimson_Queen-2007	LG4	N/A	83.6	scf26r	View
4	Cranberry-Mullica_Queen-2007	LG4	N/A	103.6	scf26r	View
5	Cranberry-Unifiedmap2013	LG2	N/A	111.2	scf26r	View
6	Blueberry-F1#10_x_W85-23-F1-2017	LG04	N/A	87.9	scf26r	View
7	Blueberry-F1#10-2017	LG04	N/A	102.4	scf26r	View
8	Cranberry-CNJ02-1-2017	LG04	N/A	97.6	scf26r	View
9	Cranberry-Crimson_Queen-2017	LG04	N/A	57.6	scf26r	View
10	Cranberry-Mullica_Queen-2017	LG04	N/A	109.8	scf26r	View
11	Cranberry-[BG//BL/BN]95-F1	LG04	N/A	90.86	scf26r	View
12	Cranberry-Composite_map-F1	LG04	N/A	85.7	scf26r	View
13	Cranberry-Crimson_Queen-F1	LG04	N/A	81	scf26r	View
14	Cranberry-GH1/35-F1	LG04	N/A	85.24	scf26r	View
15	Cranberry-Mullica_Queen_1-F1	LG04	N/A	114.5	scf26r	View
16	Cranberry-BB/CQ-F1	LG02	N/A	102.35	scf26r	View
17	Cranberry-BB/CQ-F1	LG02	N/A	96.04	scf26r	View