SCF3187, SCF3187 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF3187
Genbank ID	KP278960
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)11
Primer 1	SCF3187.forward primer: CCAGAAAACTACAGATACCCTC
Primer 2	SCF3187.reverse primer: GTACTTACCGGGACAACTCTTA
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278960

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr07	supercontig	Vcev1_p0.Chr07:23899834..23900129 .
VaccDscaff12	supercontig	VaccDscaff12:17136249..17136544 .
scaffold00192	supercontig	scaffold00192:265002..265297 .
chr7_H1	supercontig	chr7_H1:19021753..19022048 .
Vmac_chr10	supercontig	Vmac_chr10:18310298..18310607 .
chr10	supercontig	chr10:19881393..19881708 .
Chr07	supercontig	Chr07:18202787..18203092 .
Chr07_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr07_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:20850551..20850864 .
Chr07_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr07_Vaccinium_vitis-idaea_ssp_minus:17864231..17864546 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.