SCF28955, SCF28955 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF28955
Genbank ID	KP278679
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GT)9
Primer 1	SCF28955.forward primer: TATTCAAAGCCACTAGGCAC
Primer 2	SCF28955.reverse primer: CAAACCAAATTCTCCTTCTG
Max Length	246
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278679

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr12	supercontig	Vmac_chr12:2352932..2353149 .
chr12	supercontig	chr12:1266856..1267067 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG12	N/A	77.36	SCF28955	View
2	Cranberry-Crimson_Queen-2007	LG12	N/A	67.8	SCF28955	View
3	Cranberry-Mullica_Queen-2007	LG12	N/A	94.1	SCF28955	View
4	Cranberry-Crimson_Queen-F1	LG12	N/A	0	SCF28955	View
5	Cranberry-CNJ02-1-2017	LG12	N/A	71.8	SCF28955	View
6	Cranberry-Crimson_Queen-2017	LG12	N/A	59.1	SCF28955	View
7	Cranberry-Mullica_Queen-2017	LG12	N/A	87.1	SCF28955	View
8	Cranberry-Composite_map-F1	LG12	N/A	5.82	SCF28955	View
9	Cranberry-Mullica_Queen_1-F1	LG12	N/A	2.98	SCF28955	View