SCF34584, SCF34584 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF34584
Genbank ID	KP278696
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AG)10
Primer 1	SCF34584.forward primer: GTCTGTTTGGAAGAAGAAGGT
Primer 2	SCF34584.reverse primer: CTGTTCGTCAATCCCTAGC
Max Length	213
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278696

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr12	supercontig	Vmac_chr12:14440939..14441112 .
chr12	supercontig	chr12:13534359..13534534 .
Chr05_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr05_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:17413451..17413614 .
Chr05_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr05_Vaccinium_vitis-idaea_ssp_minus:17669581..17669744 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG12	N/A	39.89	SCF34584	View
2	Cranberry-Crimson_Queen-2007	LG12	N/A	37.8	SCF34584	View
3	Cranberry-Mullica_Queen-2007	LG12	N/A	45.5	SCF34584	View
4	Blueberry-F1#10_x_W85-23-F1-2017	LG12	N/A	40.3	SCF34584	View
5	Blueberry-F1#10-2017	LG12	N/A	42.9	SCF34584	View
6	Blueberry-W85-23-2017	LG12	N/A	39.3	SCF34584	View
7	Cranberry-CNJ02-1-2017	LG12	N/A	37.2	SCF34584	View
8	Cranberry-Crimson_Queen-2017	LG12	N/A	31.2	SCF34584	View
9	Cranberry-Mullica_Queen-2017	LG12	N/A	43.1	SCF34584	View
10	Cranberry-Composite_map-F1	LG12	N/A	52.87	SCF34584	View
11	Cranberry-Crimson_Queen-F1	LG12	N/A	28.72	SCF34584	View
12	Cranberry-Mullica_Queen_1-F1	LG12	N/A	55.5	SCF34584	View
13	Cranberry-Mullica_Queen_2-F1	LG12	N/A	34.85	SCF34584	View