SCF4386, SCF4386 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF4386
Genbank ID	KP278612
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TTC)9
Primer 1	SCF4386.forward primer: GTTACTCATTTCTTTGCTGAGG
Primer 2	SCF4386.reverse primer: CCTCTTAGTGTTGGAGTTTCAT
Max Length	203
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278612

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr01	supercontig	Vmac_chr01:139211..139387 .
chr1	supercontig	chr1:48630663..48630836 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG1	N/A	113.64	SCF4386	View
2	Cranberry-Crimson_Queen-2007	LG1	N/A	100.6	SCF4386	View
3	Cranberry-GH1/35-F1	LG01	N/A	0	SCF4386	View
4	Cranberry-CNJ02-1-2017	LG01	N/A	105.1	SCF4386	View
5	Cranberry-Crimson_Queen-2017	LG01	N/A	97.2	SCF4386	View
6	Cranberry-Composite_map-F1	LG01	N/A	2.9	SCF4386	View