SCF53282, SCF53282 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF53282
Genbank ID	KP278726
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)11
Primer 1	SCF53282.forward primer: GACAATCACATACCCATAACAG
Primer 2	SCF53282.reverse primer: CCACTCTTTCCCTCTATCG
Max Length	234
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278726

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr04	supercontig	Vmac_chr04:34620118..34620325 .
chr4	supercontig	chr4:1714967..1715155 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG4	N/A	111.3	SCF53282	View
2	Cranberry-CNJ02-1-2007	LG4	N/A	95.03	SCF53282	View
3	Cranberry-Crimson_Queen-2007	LG4	N/A	79	SCF53282	View
4	Cranberry-Mullica_Queen-2007	LG4	N/A	98.9	SCF53282	View
5	Cranberry-CNJ02-1-2017	LG04	N/A	95.4	SCF53282	View
6	Cranberry-Crimson_Queen-2017	LG04	N/A	56.2	SCF53282	View
7	Cranberry-Mullica_Queen-2017	LG04	N/A	103.8	SCF53282	View
8	Cranberry-[BG//BL/BN]95-F1	LG04	N/A	85.18	SCF53282	View
9	Cranberry-Composite_map-F1	LG04	N/A	83.32	SCF53282	View
10	Cranberry-Crimson_Queen-F1	LG04	N/A	79.22	SCF53282	View
11	Cranberry-Mullica_Queen_1-F1	LG04	N/A	112.12	SCF53282	View